Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MQAETILEGLEAGLPQAVSSGLSLVPAPGLVLTCLSAPSGPGGMALEPPPTTLRKAFLAQSTLLESTLEGAPEWAAPHPEEQRRSPPACSQHTPPLPSTPTGPPPCSPGGNHPLCALSGRGGGRCSIPSLSSSSTFSLFSSGCWNPRVKLRVRKSQSQGRAGQLI |
1 | 2pffA1 | 0.08 | 0.08 | 0.95 | 0.68 | DisCoVER | | GGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGVTFKDKYVLITGAGKLQGLLQGGAKVYGAKGSAIIPFAAQVILPMANQLTVCGAIIGVMAD---LNG-G- |
2 | 1e6vB2 | 0.10 | 0.08 | 0.78 | 0.83 | DEthreader | | LYDCVAEVPIEVLSPMNIQVGLR--V---ATQQMEMGD-ALGP-FERLHLLGYAYQGNANMVYD--IVKKHVEGAAVNQQGVSATINGVDFGRAETAGFFGGGGPGI-------FHGNHIVTRSGAIPVAAMALD--------------------EIDEFREPMK |
3 | 4rkiA | 0.08 | 0.08 | 1.00 | 0.61 | CEthreader | | LDKKDASSIASHIHLEVIKEKLFLKASSDIGLKSYIFTQSSDKEGVGTINGKKFLDIISCLKDSNIILETKDDSLAIKQNKSSFKLPMFDADEFPEFPVIDPKVSIAFKKIAPVIEQTSRELAGILMQFDQKHQTLSVVGTDTKRLSYTQLEKISIHSTEEDISC |
4 | 1qbaA | 0.09 | 0.09 | 1.00 | 0.57 | EigenThreader | | LVKPAADVVSQRFALLAVSGAYELKIGKEAQVIGFDQAGVFYGLQSILSLVLLDQMAAYHFHLSDDEGWRIEIPGLPELTEVGGHDLSETTCLLPQYGQGPAHALVDPTDTSNTTSVQFFNRQSYLNPCHGIDRMQAWQDGLKDASRVGVNFWDTLYWGGFDSVN |
5 | 1m6yA | 0.28 | 0.13 | 0.46 | 0.31 | HHpred | | FQANRELENLKEFLKKAEDL-----LNPGGRIVVISFHSL---------EDRIVKETFRNSKKLR---ILTEKPVRPSEEEIRENPRARSGRL------------------------------------------------------------------------ |
6 | 2pffB | 0.26 | 0.07 | 0.26 | 0.48 | MRFsearch | | ----------------------------GVRVIVAGTGGGGGGGG------------------------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGG---------------------------------------- |
7 | 3mcmA3 | 0.16 | 0.07 | 0.45 | 0.42 | FFAS-3D | | IHNDNVCDYIEQKKQILLKHGIAIYFDIGFALVGHSRKPSVLGLTKDSNLATLDRATRELSRKL---EKLDIDIIRVH--------------------------------------------------------------------------------------- |
8 | 4btgA | 0.13 | 0.13 | 1.00 | 0.76 | SPARKS-K | | PNFYALVDCVRASMLTALSSVDSGALAPALILANAATTAFERSRGNFDANAVVSSVLTILGRLWSSTPKELDPSARLRNTQRGRAEVIFSDEELSSTIIPWFISEVSPFKLRPINETTSYIGQTSAIDHMGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQRFL |
9 | 1dkaA | 0.12 | 0.05 | 0.39 | 0.69 | CNFpred | | ARANVMGDRLRRGLLDLMEDCIGDVRGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSM----------------------------------------------------------------------------------------------------- |
10 | 2wjvA | 0.05 | 0.04 | 0.88 | 0.83 | DEthreader | | ---------IHD-PACVVYCFCNGRGN-----HIHLKEVTTVLEVLFLSVKIPSEEQLRADGYYHKLLGPLSLIIVGDRLQPSNFYEGL--ADKPMFKLLKKPDIGIITPYEGQRSYLVQQQEVIISCVRAEHGLNLVALTRAGVI-IV-GNPLSKQPLWNHLYY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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