Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MGLKVGFQGGGSFRKDALWLEGGVSARWARAPHSAPLRPPRELHAAPPSATPTQTVMRPAGFPRRTRLMVRSAPPTQRPPTGSGCVSGLWRKGLGLRPQTLLRVGGVVLSSAPALRPRLGPGLRPRTS |
1 | 2lnvA | 0.05 | 0.03 | 0.58 | 0.62 | DisCoVER | | --------------LPPSTL-----NLSLTGVMAGDD--------D-SRSIAIISK---DN-----EQFSRGVNE--EVPGYNAKI------VSIRPDRVVLQYQRYEVLGLY--------SQEDS-- |
2 | 6rutB1 | 0.08 | 0.07 | 0.85 | 0.83 | DEthreader | | TWNNNFANIGNMV-IFGGNG----HATKNPLSIGWPYVLFGGLLGTEYVPRMAVSG-----------AGTLTMGDTSKSFRFTT-GPFLPQRNQLLLR-SLLGWTSQDVGLVFGFQSYSLWD-ALKSA |
3 | 3qq2A | 0.11 | 0.10 | 0.95 | 0.56 | CEthreader | | WSLEGGRRFELPNDWFAEPQAEVMLWRTSGKRYRASNGLRVKVDANTATLGRLGLRFGRRIVQPYARLGWTQEFKSGRVELGAGVDAALGKGHNLYASYEYAAGDRINIPWSFHAGYRYSF------- |
4 | 6em5m | 0.04 | 0.03 | 0.89 | 0.50 | EigenThreader | | HIECIWNPDANNGI--LAVAVGENIHLIV-PPIFGYKKTVKTVQPDSGNTSARWLSKIDPRGDNLIASSF-----------DKRVLWHDLDLASTPYKAVRSVNHKKAADDGTGHKVINSLGPREAWL |
5 | 6v4xI2 | 0.10 | 0.09 | 0.82 | 0.24 | HHpred | | SIIKLTTLSGVQEESALCYLQVDLDCGWDEHFIIDSLRHVHQIHLGALPYGLNCAIYATIDFTFIHGLSITPLPAGHMIGG------------TI----WKIVKEEIVYAVDFNHKREIHL------- |
6 | 1zlgA3 | 0.10 | 0.05 | 0.54 | 0.53 | MRFsearch | | --AAVNVHGTRGFTAPSKHFRSS--------------------KDPSAPPAPANLRLANSTVDGSVTVTIVWDLPEEP--------------------DIPVHHYKVFWSW----------------- |
7 | 2h6oA2 | 0.28 | 0.20 | 0.70 | 0.31 | FFAS-3D | | -----------------------------NATYSVPM------VTSEDANSPNVTVTAFWAWPNNTETDFKKWTLTSGTPSGCENISGAFASGLGTAPKTLITTHKVIFSKAPE-STTTSPTLNTT-- |
8 | 6xo4C | 0.19 | 0.18 | 0.93 | 0.78 | SPARKS-K | | DKTFPIMLNG-QVNGYACVVGGRVF-----KPLHVEGRIDNEQLAAIKLKKASIYDLEYGDVPQCMK--SDTLQYTSDKPPGFNRFTGVGGKGDSGRPILDGRVVAIVLGGVNE-GSRTALSVVTWNQ |
9 | 5hxkA | 0.23 | 0.10 | 0.44 | 0.44 | CNFpred | | ---------------AILAVAGGVSWERLRLEPFLAWEGEEALYPAPELSEPHRFVLRRP--QVQIGLAYPDV------------------------------------------------------- |
10 | 5nz7A | 0.06 | 0.05 | 0.85 | 0.83 | DEthreader | | YVNLLIGNRLTLQTTPKSVVDRFGRGEEGPAQFYLQIFYDDNIVE-ATCKVITIFLVP-HKKGFPTELQRIE--IKLSITYQSFCTDYDFVTLHPGALGATFTGLS-------------SFGQQ--RI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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