Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MSVLSPEIKCETSKFTRSSFGSCLIFESSWKKAVLETQKIKKEYTTAFGLEELKECIKMPYLPGLQSCQKSVSSTPLEVPKRLPRADAEVSAVRLKKTKETCSVAPLWEKSKGSGFSDPLTGAPSQYLERLSKIAILEYDTIRQETTTKSKKSKKRDLRD |
1 | 4b4tH1 | 0.10 | 0.04 | 0.38 | 0.61 | DisCoVER | | ---------------------------------------------------------LAHPLQ----VARCTKIIKGDA---K--------YVINLKQIAKFVVGLGVSPIEEGMRVGVDRSKYNIELP-LPP--------------------------- |
2 | 6xw2A | 0.08 | 0.06 | 0.73 | 0.83 | DEthreader | | ------E------LTAEA--H---------DQLTEEQIAEFKEAFSLFDGTLFLAMMATEIREGVDKDGNG-------YIGA--------ELRHVMTNLG---EKLEVGELIQVNYEFVQMMTRRKWNKAGHAVRAIGRLSSMYFA--DWCVSKKTFKST |
3 | 2y4oA1 | 0.10 | 0.09 | 0.90 | 0.56 | CEthreader | | YPFGLFAVPREQVVRVHASSGVVGYTARDIDTWANVTARSIRAAGG-YGLSEVMGPGVACECVETKDGPVIWEYPEIIDPVTGEVLPDGSQGELVFTSRTRDLTALLPPTARAMRRLAKITGSDDMLIVRGVNVFPSQIEEIVVA--------------- |
4 | 4htoA | 0.07 | 0.07 | 0.99 | 0.55 | EigenThreader | | -SQTVASHVPFADLCSTLERIQKSKGRAEKIRHFREFLDSWRKFHDALHKNPAMRLILPFAMIAYFVLKPRCLQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLITQSSALEQKWLIRMIIKDLKLGVQTIFSVFHNDAAELHNVTTDLEKVCRQ |
5 | 6y22A | 0.19 | 0.16 | 0.82 | 0.34 | HHpred | | MEKLSTASGYSDLAGHLTKCS-H-AFHLLCLLAMYCNGNLQPSCKTIYGEKTGTEVLRFQSLPGHEDCGTILPEHPFTFPRYLPDNAQLIFTVGTSSTTGETDTVVWNRNITGHGYPDP------NYLQNVLALAAQGV--------------------- |
6 | 6zkal | 0.14 | 0.06 | 0.39 | 0.45 | MRFsearch | | ----------------HRIPARCHAFEKEWIECAHGIGSIRAEKECKIEFEDFRECLL--------------------------------------------------------------------RQKTMKRLNAIKRQRDKLIKE------------- |
7 | 2xd8A | 0.11 | 0.10 | 0.95 | 0.43 | FFAS-3D | | MANANQRSNLSTGTGYGGATDKYALYLKLFSGEMFKGFQHETIARDLVTKRTLKKSLQFIYTGRM-TSSFHTPGTPILGNADKAPPVAEKTIVMDDLLISSAFVYDLDETLAHYELRGEISKKIGYALAEKYDRLIFRSITRGARSASPVSAT------- |
8 | 2r18A | 0.12 | 0.09 | 0.72 | 0.78 | SPARKS-K | | -----------------------TPEEAQREKDTRISKKMETMGIYFATPEWVALNHRGPSPGQLKYWQNTREIPDPEDYLDYVHAEKSRLA-----SEEQILRAAYGAPGQAE--------PPQAFIDEVAKVYEIQMKDLLLTAMEMKH--------- |
9 | 4dlpA | 0.08 | 0.02 | 0.24 | 0.37 | CNFpred | | --------------------------------------------------------------------------------------------------------------------------ALHLALGAIFAVVAEANRYFAGQEPWALRKTDPARMGT |
10 | 1g8xA | 0.06 | 0.04 | 0.76 | 0.83 | DEthreader | | FNYGKFVSSSSDA--SFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDG----------------------------R-QPPGALLLILHSFSKNYVTHYAGQVLDQLRCGVLEGIRITRKGFPNRQYRF--I------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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