Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MPVIPIPRRVRSFHGPHTTCLHSACGPVRTTHLVRTKYNNFDIYLKSRWMYGFIRFLLYFSCSLFTSILWVALSVLFCLQYLGIRIFLRFQYKLSIILLLLGRRRVDFSLMNELLIYGIHVTMLLVGGLGWCFMVFVDM |
1 | 4ev6A | 0.06 | 0.06 | 0.90 | 1.00 | DEthreader | | LIKAILHLISKKPR------VFERGIGFTDRENFEDLYYDTLQLIDMSATYREVLTSMMDITLSLENIKMNQIMKILTMVTTIFAVPMWITGIYGMFYLPLANNPQGF-WLVMALMVVIIMIFVYIFRRSGW------- |
2 | 3vr8D | 0.06 | 0.03 | 0.50 | 0.86 | DisCoVER | | --------------------------------------------------------------------IHGREMDLCLALALTLHVHWGVWGVVNDYGRPFVLGDTLAAAVRVGAYITACLLAGLLYFNVGLTRAFEM- |
3 | 2h1nA2 | 0.03 | 0.03 | 0.85 | 0.83 | DEthreader | | LNASTGGGSVTHEGHFQVYE---T-PWEL---F-FG-EDADKYRFAHLSDALLF-LPYGVAVDEFQHAVYEN-PD---TP--A-ERKSVWRNIEKAYLPTR-DYADHDYLEGGFWQRQ-GHIYTDP-FYYIDYTLAQA- |
4 | 1q6uA | 0.08 | 0.08 | 1.00 | 0.48 | CEthreader | | KEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTLQAFEARVKSSAQAKMEKDAADNEAKGKEYREKFAKEKGVKTSSLVYQVVEAGKGEAPKDSDTVVSFRLDLKNIKKGGKIKLVIPPELAYGKNSTLVFDVEL |
5 | 4zsvA | 0.10 | 0.09 | 0.96 | 0.55 | EigenThreader | | FEDKETTYELQKGVPPALSRLGFELLKLGYTQAEKPKTAEAKARHLANLKKEFEEFIGLAAQACIRACERYLALCEQRQHAGDCADLCRLAALLLER------RSPWAPAACELAARYALACAERCDECAGACRRFVAA |
6 | 1ifdA | 0.24 | 0.06 | 0.27 | 0.20 | HHpred | | --------------------------------------------------------LQASATE-YIGYAWAMVVVIVG-ATIGIKLFKKFTSKAS-------------------------------------------- |
7 | 6u8yH1 | 0.11 | 0.07 | 0.68 | 0.57 | MRFsearch | | -----------------------------------------HFAALFILVIAVVSFLMALYAMLFLLLLLGATGMIATGDIFNLFVFMEITAISAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLVGVALIYGAT--- |
8 | 5tj5D | 0.16 | 0.12 | 0.72 | 0.61 | FFAS-3D | | ---------------------IGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVAVLHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFVGIVLI------LIFSEVLGLYGMIVALILNT------------ |
9 | 5u71A1 | 0.15 | 0.14 | 0.96 | 0.67 | SPARKS-K | | YIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRS-----PIFTHLVTSLKGLWTLRAFALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILTGEGEGRVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSV |
10 | 3rkoB | 0.08 | 0.06 | 0.71 | 0.77 | CNFpred | | -----------------------------------------QTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTVLHLVGIVGTLLLAGFAALVQTDKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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