Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | VTDQLIKKIGVKNISKVSVLMTTIVPVDNILKPTSFGRMCAEQLMTEMSMGGFNVIESRMTEGYFIRNNVGEFMLSRDVKLVGKQHNARLALVGTYSESGGQVLINVRLVDTENAGVVATANTMMN |
1 | 4q6lA | 0.10 | 0.10 | 0.93 | 1.17 | DEthreader | | PVSKMLQADGV-TA-GSVLLVDSVNNRTNGS-L-N-ANEATETLRNALANNKFTLVSVQLSKQLSPQD----SLGTRSAIGIARNVGAQYVLYSSASGNVNAPALQMQLMLVQTGEIIWSGKGAVQ |
2 | 4q6lA | 0.10 | 0.10 | 0.91 | 1.17 | DEthreader | | PVSKMLQADGV-TAG-SVLLVDSVNNRTNGS-L-N-ANEATETLRNALANGKFTLVSVLSKLSQDS------LGTRSKAIGIARNVGAQYVLYSSASGNVNAPALQMQLMLVQTGEIIWSGKGAVQ |
3 | 4q6lA | 0.10 | 0.10 | 0.97 | 1.46 | HHpred | | AMQPLVSKMLGV-TAGSVLLVDSVNNRTNGSLN---ANEATETLRNALANNGFTLVSVQQLSMAKQQLSQDSLGTRSKAIGIARNVGAQYVLYSSASGNVNAPALQMQLMLVQTGEIIWSGKGAVQ |
4 | 4q6lA | 0.09 | 0.09 | 0.92 | 1.83 | DisCoVER | | LVSKMLQAV----TAGSVLLVDSVNNRTNG--SL-NANEATETLRNALANGKFTLVQLSMA--KQLGLSPQDSLGRSKAIGIARNVGAQYVLYSSASGNVNAPALQMQLMLVQTGEIIWSGKGAV- |
5 | 4q6lA | 0.09 | 0.09 | 0.96 | 1.10 | MRFsearch | | --QPLVSKMLQAVTAGSVLLVDSVNNRTN---GSLNANEATETLRNALANNKFTLVSVQQLSMAKQQLGLDSLGTRSKAIGIARNVGAQYVLYSSASGNVNAPALQMQLMLVQTGEIIWSGKGAVQ |
6 | 4q6lA | 0.10 | 0.10 | 0.98 | 2.03 | SPARKS-K | | AMQPLVSKMLQGVTAGSVLLVDSVNNRTNGSLNA---NEATETLRNALANNGFTLVSVQQLSMAKQQLGLSPQDSLGTAIGIARNVGAQYVLYSSASGNVNAPALQMQLMLVQTGEIIWSGKGAVQ |
7 | 2miiA | 0.08 | 0.08 | 0.94 | 1.34 | MAPalign | | AMQPMVSKMADGVTAGSVLLVDSVNNR--TNGSL-NAAEATETLRNALANNKFTLVSL----SMAKQQLGLSPSLGSKAIGIARNVGAHYVLYSSASGNVNAPTLQMQLMLVQTGEIIWSGKGAVS |
8 | 2miiA | 0.08 | 0.08 | 0.98 | 1.30 | CEthreader | | AMQPMVSKMADGVTAGSVLLVDSVNNRTNGSLN---AAEATETLRNALANNKFTLVSAQQLSMAKQQLGLSPQDSLGTAIGIARNVGAHYVLYSSASGNVNAPTLQMQLMLVQTGEIIWSGKGAVS |
9 | 4q6lA | 0.10 | 0.10 | 0.98 | 1.62 | MUSTER | | AMQPLVSKMLQAVTAGSVLLVDSVNNRTNGSLN---ANEATETLRNALANNGFTLVSVQQLSMAKQQSPQDSLGTRSKAIGIARNVGAQYVLYSSASGNVNAPALQMQLMLVQTGEIIWSGKGAVQ |
10 | 2miiA | 0.08 | 0.08 | 0.96 | 2.34 | HHsearch | | MVSKMLGAD-GV-TAGSVLLVDSVNNRTNGSL---NAAEATETLRNALANNGFTLVSAQQLSMAKQQLGQDSLGTRSKAIGIARNVGAHYVLYSSASGNVNAPTLQMQLMLVQTGEIIWSGKGAVS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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