Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MTAIRLREFIERRPLIPPSIFIAHQGRDLQGYYPGQLARLHFDHGAKRAPRPLIDLTIPPKRKYHYQPQFDQQTLIRYICFRRHSKPAEPWYKETTYQRDYSLPFYEIDWNQKLATVSLNPRPLNSLPELYCCEERGGFE |
1 | 3it8L2 | 0.03 | 0.02 | 0.65 | 0.91 | DisCoVER | | DTTPTVKVTGNELNMTLE---C------TVNSFYPPDVIT-----------------KWI--ESEHFYKYEWGEPGFPW--NI-------K----KDKDNTYSLTDLVRTSSQPVCVVF-HDTL----AQVYTCSE--G- |
2 | 6dk9A | 0.06 | 0.05 | 0.77 | 0.83 | DEthreader | | VVPPP-NSTARLVEYAAKELTVLHS-RVFQYSVAQLYCLHDIATTDKNMSFYGGILELVNATGGNQ---DYADAVTEAIIRHQD-LTGTGYIT-T-LG---LILQT------------------QFPRLWCFAVVDT--- |
3 | 6canA | 0.06 | 0.06 | 1.00 | 0.49 | CEthreader | | EVIEEIKPSIWNITFLKDGYYFTRFYRKEKTPDGVNPPAARMFWKDREGERMVFGEGLTSGYFMSIRKSSDGKFAIVTLTYGWNQGEVVPVEAIDVVNGKLYILTKEGKGLGKIIAIKNGKIDEVIPEGEFPLEWAVIVR |
4 | 4q2eA | 0.05 | 0.05 | 1.00 | 0.57 | EigenThreader | | VVAPFVVLCFVSYESLIGLVSAILILAGYELITLVILLALYPVLYGLVFSFFLPIYRDFGAANALLVLTSTWVFDSFAYFTGRKSLEGVIGGFLGVPFAATVAIMDTFGDIFECALKRHYGVKDSGKTLPGHGGMLDRID |
5 | 3hy5A | 0.16 | 0.09 | 0.58 | 0.28 | HHpred | | ---------------LRTS-DLRKMVDMLQDSFPARFKAIHFIHQP----WYFTTT------YNVVKPFLKSKLLER-VFVHG--D---D-------------------LSG-FYQE----IDENILPSDFGGTLPK--- |
6 | 2pffB | 0.19 | 0.06 | 0.34 | 0.63 | MRFsearch | | --------------------VLTHRNKD------GTGVRVIVAG----------TLDINPDDDYGFLYKTSKAAQDVWNRADNH-------------------------------------------------------- |
7 | 4ytkA | 0.20 | 0.15 | 0.74 | 0.38 | FFAS-3D | | ---------------LEEGSYV----RIKRGIYKGDLAMVDQISENNLEVMPRLDYGKFDERPTAPPQLFNPTMALRLDQANLYKRDDRHFYKNEDYIDGYLYKSFRI---QHVETKNIQP----TVEEL---------- |
8 | 6emkG | 0.07 | 0.07 | 0.97 | 0.86 | SPARKS-K | | HYASYHGRYLICVYLIQLGHDKHELIKTFKGNTCVHLA--LMKGHEQTLHLLLQQFPRFINHRGENGRAPIHIACLSLL--IGVGADLWVMDTNTPLHVCLEYGSISMKMLLNEVRDKGNWKPIDVAQTFEVGNIYSKVL |
9 | 3wyiA | 0.24 | 0.08 | 0.33 | 0.45 | CNFpred | | -----------------PELLIRTSGERISNFLIWQVSEFIFNQ--------------------KLWPDFDEDELIKCIKIYQ--------------------------------------------------------- |
10 | 5anbK1 | 0.03 | 0.03 | 0.85 | 0.83 | DEthreader | | LIKFTPQEAYSL-ETQQSTGLEDTDD-----SHLY-SEQGN-----IKKELMKTLWGDYKQGKKPLVQLILE-NIWSLYDAVLKK-DK-DKIDKIVT--SL-L-IICWLP-ISHAVLA-MVCQKLPDITERVERMCTDSK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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