Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | CTVDVGRNVSIREQCRLRNGATFSKGDIEGNFSGPVVVELDYEDIDITGERQRLRFHLSGLGCPTKENIRKDNESDVNGGIRWALYIQTGDAKYGIRNQHLSIRLMYPGEKNTQQLLGSDFSCERHRRPSTPLGKNAEVPPATRTSSTYGVLSAFVVWIGSGLNIIWWTGIVLLAADALGLGERWLRLALSHRDKHHASRTAALQCQRDMLLRQRRRARRLHAVSEGKLQEEKKRQSALVWNVEARPFPSTHQLIVLPPPVASAPPAVPSQPPEYSSVFPPV |
1 | 4kncB2 | 0.10 | 0.04 | 0.35 | 0.77 | DisCoVER | | LSRKLRNEVLLNLPIR-SGSYVAD--VTYSDPSV-HELKNTIWYMN----GRREQLKIE-QSK-----------AVD-TGGRYVFQLRNDSDWADQQFLSLEIEAPMP--QGLE-V---QASICQA------------------------------------------------------------------------------------------------------------------------------------------------------------ |
2 | 6lonB | 0.07 | 0.05 | 0.73 | 0.83 | DEthreader | | IQFT----V---PHVDI-ERARLVAMVYILAG-------LYIDGDYLMEAPWTRSAQWVPDYEAMKRGFIQMVCIPQCWFVMFSRIE------------KASAIISNMKLECMWV-DMAQF-IDLYINPT--------GN-EFQEAHWEAISGCTETRMPNR-D--TYT-SG--C--VY--I--NFATALEMLMYYKAQHINLLQKAFQQQHIVDRLRPQHQSEKI--SSRDRGIHVDVRY--------LADGSS-----INRASRLLWLKL---------- |
3 | 1dqtA | 0.09 | 0.04 | 0.41 | 0.43 | CEthreader | | ----IQVTQPSVVLASSHGVASFPCEYSPSHNTDEVRVTVLRQT---NDQMTEVCATTFTEKNTVGFLDYPFCSGTFNES-RVNLTIQGLRAV---DTGLYLCKVELMYPPPYFVG----MGNGTQIYVIDP------------------------------------------------------------------------------------------------------------------------------------------------------ |
4 | 3zk4A | 0.04 | 0.04 | 0.89 | 0.73 | EigenThreader | | VSFVNPNAPGK------TWDEITVTWTSG-YDINDAEPFVEWG-PKEGNLVKTPAGTLTFDRNTMCG-APARTVGWRDPGYIHTSFLK--ELWPNREYTYKLGHRLFNG-TTIWS---KEYHFKAIFGDMGKAEADGSNENFQPGSLNTTKQIIQDQWDQFTAQIEPIASERDPAQTMFQYEFIEKCLASLGYSSAGFYVQELQHLWQKYK---------VDIAMVHNYERTCPIYQNVNK------EKHNLNGTSLAEFAPINTTWCSVDSCPTTTLAS-- |
5 | 4phxB | 0.16 | 0.06 | 0.35 | 0.32 | HHpred | | --------------SQLRDGMKLATGRIACEPHDGFHIWINASQNGKQNN-HELKVKIGG-GWS--------SSLIEGRGVYRQ----------GE-EKQAIFDIMSDGNQYSA-----PGEYIFSVRLERPPIKATE------------------------------------------------------------------------------------------------------------------------------------------------ |
6 | 1vt4I | 0.11 | 0.03 | 0.26 | 0.50 | MRFsearch | | -----------------------------------------------------------------------------------------------------------------------------------------------SILNTLQQLKFYKPYI------CDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGG----------------------------------------------------------- |
7 | 1ciiA2 | 0.13 | 0.10 | 0.74 | 0.48 | FFAS-3D | | --LDAQQARLLGQQTRNDRAISEARNKLS-------SVTESLNTARNALTRAEQQL---TQQKNTPDGKTIVSPEKFPGRSSTNDSIVVSGDPRFAGTIKITTSAVIDNRANLNYLLSHSGL-----DYKRNILNDRNPVVTEDVEGDKKIYNAEVA---------EWDKLLLDARNKITSAESAVNSARNNLSARTNEQKHA-NDALNALLKEKENIRNQLSGINQKIAEEKRKQ---------------------------------------------- |
8 | 6j0zC | 0.11 | 0.10 | 0.94 | 0.65 | SPARKS-K | | GIPQARTEGILGGWARELGAEVRRGYEVTADTGTSVTVEAAGAD--GSPLSLRARYVVGCDGARSSKLAGIDFPGTEPAIELRFADVAGVQLRPRFSGERVGMVMVLPMGPDR-------CRVIYFDSSQPL-------RTAPEAITFEEVADSWQRLTGEDISGAWVQGMSAGVQDAVNLGWKLALDISGRAPQGHSERHPVGQRILTNTLAQRILYLGAELMGSHVSVQRHLAGMVTGLDIRHDVGEGDHPLLRRLPDRELVVDGEKIPFYSLLRPGRAV |
9 | 3eh1A | 0.12 | 0.05 | 0.38 | 0.55 | CNFpred | | -----------------------------------DLLSLANINPD---AGFAVQLSIEESLT--------------TSLVCFQTALLYTSSKGERRIRVHTLCLPVVS-------------------------------------SLADVYAGVDVQA----AICLLANMAVDRSVSLSDARDALVNA----------VVDSLSAYGS------------------------------------------------------------------------- |
10 | 5kdvA | 0.07 | 0.05 | 0.76 | 0.67 | DEthreader | | LDALSGDSLTDSHLVALR-LQQQERIRRTLVLPANPDNT-----------------GRVSLSLEASATVRAQILAGLQE-YGQDPALVQ--Q--IVDGSW-FRVDVL--KGA-D---NQKALWLWAVRNIRMDAADTFYDRPFLKSPD-KQLVYSGA-T-----PGQTV-V--DIEIRSEVHAKVEKVRGSID-K-YGG-D-VQRFIRELNEFIDDAYTAGFAIPNQA-DCDSETLHKLPGHNQVNRLLYLHQQVSDDAN---------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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