>PF17620 (191 residues) MLPYEMVIAVLAYLSPAQILNLNLPFAYQKSVMFASNSAKVNELIRRRARDDDDNPYFYY KQFIKFNFLTNKIINVYSKTEKCIRMTFDGRYMVTRDFLMCFVNKSYIKQLLREVDTRIT LQQLVKMYSPEFGFYVNSKIMFVLTESVLAFICLKHSFGKCEWLDKNIKTVCLQLRKICI NNKQHLTCLSY |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MLPYEMVIAVLAYLSPAQILNLNLPFAYQKSVMFASNSAKVNELIRRRARDDDDNPYFYYKQFIKFNFLTNKIINVYSKTEKCIRMTFDGRYMVTRDFLMCFVNKSYIKQLLREVDTRITLQQLVKMYSPEFGFYVNSKIMFVLTESVLAFICLKHSFGKCEWLDKNIKTVCLQLRKICINNKQHLTCLSY | |||||||||||||||||||
1 | 5tpiA | 0.04 | 0.02 | 0.55 | 0.70 | DisCoVER | LPV-FPEEMMIVAPYGHAP--I-TRASEVNGANVYAFRASYRRHFESWFHAD---RATPGRIHEMESYH--GMLACVGAGLALIPRSGHQQVSAW--PL------------------------------------------AEEW----------------------------RW--LT-TWLVLDRVV-- | |||||||||||||
2 | 4u7xA | 0.05 | 0.04 | 0.80 | 0.83 | DEthreader | -FAGGSVFNTAIALGLGVPT-------G--FFSGISSDFFG-----------------------LRDTLARSNVYAAISAMLSDMPVDETISAMLFGCISLDPNILMKMIAIWLGPK--LVVITAVAVPVP--GVKVDVVTADTVNAGILALHLLTKDALANLSEDQIHSAVALGVRAATV--AGANPPAM | |||||||||||||
3 | 6opjA1 | 0.05 | 0.05 | 1.00 | 0.64 | CEthreader | GVSSRELVKKVSDVIWNSLSRSYFKDRAHIQSLFSFITGTKLDSSGVAFAVVGACQALGLRDVHLALSEDHAWVVFGPNGEQTAEVTWHDRRGQTVNAGVAERSWLYLKGSYMPSIDLHTDSLELLQLQQKLLWLLYDLGHLERYPMALGNLADLEELEPTRPDPLTLYHKGIASAKTYYRDEHIYPYMYL | |||||||||||||
4 | 4dhdA | 0.09 | 0.08 | 0.98 | 0.50 | EigenThreader | MDVVSRLHQKYGAEVEKALVRYLSIGAVLYQVKTGGKRLRPLLTLAAAEAVSGQWRPALPAAAIVELIHNYSLIYDDIIDRGDVRR---GLPTVRKAFGKAIDEGERLDILFEAEVTLDDYIKMVSLKTGALIAAAWNFGMAAGVAFQIIDDVLDIYGEIGKDIKELLDSEALRLAARYREEAERHLAKIP | |||||||||||||
5 | 5vztB | 0.17 | 0.13 | 0.79 | 0.49 | HHpred | ELPPELLVEIFASLPGTDLPSLAQVCTKFR-------RILHTDTIWRRRCREENLTGVCRDVYAKLLHPYGGLLNVVDRFKPLFRIHLMERKAAT---VECMYGHKHIQDEFTDRMSGGRQEEF-----RTWLREEWGRIFHEHMQELI-------------------------LMK-FIYTSQYDNCLTY | |||||||||||||
6 | 1vt4I | 0.14 | 0.14 | 0.94 | 0.55 | MRFsearch | --PRRLSIIAESIRDWDNWKHVNC---DKLTTIIESSLNVLEPAEYRKMFDRLSDVMVVVNKLHKYSLVEESTISIPS-IYLELKVKLENEYALHRLFRMVFLDFRFLEQKIRHDGSILNTLQQLKFYKPYICDN--DPKYERLVNAILDFLPKIEENLI-CSKYTDLLRIALMAEDEAIFEEAHKQVQ-- | |||||||||||||
7 | 3tdvA2 | 0.14 | 0.11 | 0.80 | 0.53 | FFAS-3D | -----EFMNELSAFPVETAISAGVPSEAVEDQVFPLLDESLRDYLTLRFQSYRYTPRLIHGDLSPDHFLTNL-----NSRQTPLTGIIDFGDAADYDYLLEDCGELFTRQVMRGEVDLDTHIRKVSLF---------------VTFDQVSYLLEGLRARDQDWISEGLE----LLEEDKANN--------- | |||||||||||||
8 | 6w2wA | 0.12 | 0.11 | 0.92 | 0.54 | SPARKS-K | ATDKEEVIEIVKELAELAKQSTDVAEIVYQLAEVAEHSTDPEQEALRLAEEQGDEELAAARLALKAARLLEEARQLLSKDP-------ENE--AAKECLKAVRAALEAALLALLLLAKTAALRAVEAACQLAKQYPNSDKCIKAASEAAEEASKAAEEAQRQKARDEIKEASQKAEEVKERCERA------ | |||||||||||||
9 | 6pzkA | 0.11 | 0.11 | 0.99 | 0.78 | CNFpred | IIRRAIEISDVKVYAILNKLGL-PPSWLIHWFNLYTKLNNILTQYRSNEVKNHGFTLIDNQTLSGFQFILNYGCIVYHKLKRITVTTYNQF-LTWKDISLSRLNVCLITWISNCLNTNVILTQLFLYGDCILKLFHNEGFYIIKEVEGFIMSLILNITEEDQFRKRFYNSMLNNITDAANKAQKNLLSRVC | |||||||||||||
10 | 6n7pX | 0.04 | 0.04 | 0.86 | 0.83 | DEthreader | -----------------Y-PRRKNDLYF-EV-KILTEVTELESILGELKNEYGSSNRFVIILLVQVTGAYINKLKFAKIELDIKEIAFKYAGLLTS-RTI-TF-F--NETGLKNGLEATAIEAVFRNLSQQISEEESGDAEDIEIPKV-NGEMDIDDIEDKLKWKYTVIGFIKSILRRYSHEYRELAFIDP | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |