Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | ATEETREPTYFTCGCVIQNHVLKGAVKLYGQFPSPKTLRASAWLHDGENHERHRQPILVEGTATATEALYILLPTELSSPEGNRPRNYSATLTLASRDCYERFVCPVYDSGTPMGVLMNLTYLWYLGDYGAILKIYFGLFCGACVITRSLLLICGYYPPRE |
1 | 3cjjA2 | 0.09 | 0.06 | 0.66 | 0.46 | DisCoVER | | -------Q-IPGKPEISASELTAGVPNK-----------VGTCVSEGSYP-AGTLSWHLDGKLVPNEKGVSVKEQTRRHPETGLFTLQSELMVTPARGGPRPTFSCSFSPGLAL-RT-----------------------A-------PI--QPRVWEPV- |
2 | 3qqcA | 0.05 | 0.04 | 0.82 | 0.83 | DEthreader | | RRVISKVMFKLLDELAMVI----ILSPEI-------KMSAVEVPDTY-DP--IEGGV---------------MDKRMETCGGRAECPGHFGHPVIPTRVLTVLPVPVRPSIDDLHKLVDIIRINNRLLWDLLQYHVTTYINNTLAQRLKEIVLADNLVLIG |
3 | 6q4wA | 0.07 | 0.07 | 1.00 | 0.67 | CEthreader | | TLVEHAMQYQLEDPFLVKINGEALFGGVRVTKDHGKVSGYVCDFYRGKIDDLHYFTSGPKNMKDIRLIGLADGKIGVFSHHCVTGFIIIDSLDHTLFGDAWGGVNQPYLLSTGKIGCISHHGYLDVINVYCITSFVYKPSTNTCYDYKILGTKNCFPEYPA |
4 | 1st8A1 | 0.04 | 0.03 | 0.82 | 0.70 | EigenThreader | | -----------------------WMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNWIHLDPAIYPTQE---ADSKSCWSGSATGNIPAMLYTGSDPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDN---NGMAFLYQSTDFVNWKR |
5 | 2f1lA | 0.14 | 0.10 | 0.71 | 0.31 | HHpred | | --------DLVVIGKIVSVYGIRGEVKVYSFTDPLDNLLDYRRWTLRRD--GEIRQAELVRGRLHG-------KVLAAKLKGLDDRGYEICIPRSELPSYQLEGLKVIDGRQLLGVIDHLLET-GANDVV-VK---------------------------- |
6 | 2pffB | 0.09 | 0.04 | 0.47 | 0.60 | MRFsearch | | -----------------------------------TQFKATHILDFGP----------------------------------GGASGLGVLTHRNKDGTGVRVIVAGT----MGMDLYKTSKAAQDV--WNRADNHFKDTYGFSILDIVI----------- |
7 | 3chnA4 | 0.19 | 0.10 | 0.53 | 0.34 | FFAS-3D | | ---ALNELVTLTC-------------LARGFSPKDVLV---RWLQGSQE---------------LPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDKGDTFSCMVGHEALPLAFTQK------------------------------------------ |
8 | 2ldkA | 0.06 | 0.06 | 0.93 | 0.63 | SPARKS-K | | SVDKDVEALSFSIVAEFDWGPPTWPATFETHEFTVGG--KAAYYMTGPDGTKARGWWQFTTIEAPDHLEFDDGFADEHGAPVDELGVTHATVKLEPLENRTRMTIISTFES--EEQMQKMAEMGMEEGMREAIEQIDAVLSEPANALEHHHHHH------- |
9 | 3rkoC | 0.16 | 0.04 | 0.27 | 0.56 | CNFpred | | ----------------------------------------------------------------------------------------------------------------PTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV----- |
10 | 5yi6A | 0.08 | 0.06 | 0.80 | 0.67 | DEthreader | | DNF-TVIPYHQYASIYNHQKFKFFTFSLLQIRTI-GKAYLYIS-S-PN--NEF-E-FVLLKLRVG--ISPIYLK-TMI-ETEDGLKTYDLNLKLMNF-EFEVKFPKMRIKNDI-C--------VFKVIKGYEGFGEKNSM------G-FGM--VV-NVED- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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