Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | VYVLLFDVFLSLVVGAYSGIAPPSIPPVPTYASAQLTASLITWTVGWPPITLWPQITLIPPFSILGANFPGLTIPSLTIPGVTLFSISFSWLAPIIYIANWIIWVFQTVASVLSYLLNIFTGSVGLLSSVPVLGPFLTAFVLIVNFVLVWELIKLIRG |
1 | 3ba6A4 | 0.07 | 0.05 | 0.72 | 0.68 | DisCoVER | | NNMKQFIRYLISSNVGGLPTDPATLGNPAIGGYVGAATVGAAAWFMYAGPGV--TYHQLTHFMQCTEDHPHFEG---LDCEIFEPMTMALSVLVTIEMC-NA--L----------------------------------NSL-SENWVNIWLLGSVI- |
2 | 2cy8A | 0.11 | 0.08 | 0.77 | 0.83 | DEthreader | | DAQ--GGH-GALV---------LGHGHPRAAI-EAPLEVRWA-RIVFPSIRK----LRFTGSG-T--TTLLARVFTLFQPLTCLAGGNPITAAAAIAAIDTILDVCAKINDLGQFAREMAYFHLMPGARP--GGRGS--VF--LS--AQHE------- |
3 | 5azdA | 0.12 | 0.12 | 0.99 | 0.69 | CEthreader | | LVFNMLSLTIAGMLAAFVFFLLARSYVAPRYHIALYLSALIVFIAGYHYLRIFESWVGAYQLQDGVYVPTGKPFNDFYRYADWLLTV-PLLLLELILVLGLTAARTWNLSIKLVVASVLMLALGYVGEVNTLWGALSSIPFFYILYVLWVELGQAIRE |
4 | 3jacA | 0.06 | 0.05 | 0.83 | 0.77 | EigenThreader | | ---------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
5 | 2ibzC | 0.19 | 0.13 | 0.66 | 0.25 | HHpred | | ------QIVTGIFMMHY----SSNI--ELAFSSVEHIMRDVH--NGYI----------LRYLHANGASF--------------FFMVMFSYRSPTLWNVGVIIFTLTIATAFLGYCCSGATVITNLFSAIPFVGNDIVSWLW---------------- |
6 | 2ibzC | 0.16 | 0.14 | 0.89 | 0.42 | MRFsearch | | -FIIAAMVIMHLMALHIHGSSNPLIPMHSYFIFKDLVTVFLFMLILVTPASIVPEWYLLPFYAILRS----------------IPDKLLGVITMFAAILVLLVLPFTVLSKFFFFIFVFNFVLLGQIGACHVEVPYVLTFIYFAYFLIIVPVISTIEN |
7 | 4ui9O1 | 0.18 | 0.13 | 0.73 | 0.60 | FFAS-3D | | -WVTPYKIAVLVLLSEMSRTGEGAVSLVERRRLNQQLLPLL--------------------------QGPDIT---------------VSKLLKLILANSVQIRIKLMAEGELKDMEQFFDDLSDSFSGTEVVGLFLRHMILAYSKLSFSQVFKLYT- |
8 | 7aavA | 0.11 | 0.10 | 0.94 | 0.76 | SPARKS-K | | MRLMKHDVNLGRAVFWDINRLPRSVTTV-------QWENSFVSVYSKDNPNLLFNMCGF-ECRILPKCRTSYEEFTHTKERTAQCFLRVD-DESMQRFHNRVRQILMTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNS |
9 | 7d3uD | 0.11 | 0.09 | 0.90 | 0.68 | CNFpred | | --HTKIAIYAIYRIYAVIFDGDSRYLWVGVVVFSATMLIGVLGAVGEAAPRSILAFHMVSQIGYILLGV--------------ALFGPIGLTAGIFYLLHHMIVKAALFLAIGAIEVRYGPRLSGLAKTEPLVAVAFFASAMSLAGGFVAKLSLIIAA |
10 | 5owvC | 0.05 | 0.03 | 0.68 | 0.83 | DEthreader | | GRIQELCKELNEPFMH---ASYLNEKEVFSL-DK--NVLEKITLI-CKEAKD------------------------EQSYENFSLLLTQLDTTVLKEKFVKRKILNLCEILEDENQLFVGIFDRLLNQFQYEKHLLLA-------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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