Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MLVSKSNGFNASAVLGSGSYNENKSSKHMELLAHSILKLICKEAASETYRGALETLQKMMSECIYQEGNAFVIMGAGEQLKRIKYEVGENNLKVFNVHFNNNHELVSSGEPDVICLSKQVWENLLIKLKLENNENVFSETKKLSNKNNADQFFECAKRNE |
1 | 1rcuA | 0.13 | 0.09 | 0.72 | 0.61 | DisCoVER | | KKVV----VVGYSGPVNKSP----VSELRDICLELGRTLA--K--------G---------------YLVFNGGRDG-VELVSQG-V--REAGGTVVGILPDEEAGNPYLSVAVLLNADVVV-SIGGEIGTAIEITGGWTDRIS---HQAWTVEAV---- |
2 | 4qn1A | 0.06 | 0.04 | 0.68 | 0.83 | DEthreader | | ------------------K-CGTECEEAHRQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEKG-SRLAHN--------LELLIHPGIPPRDLEAK-REVLAATERLRV-----------------------LHIIEEVEQNRIKLLNDKAVATSQQ |
3 | 3jzdA | 0.11 | 0.11 | 0.99 | 0.34 | CEthreader | | RVVFGAGSSSQVAAEVERLGAKRACTPNQQAEAERIADLLGPLSAAGAVHVPIESARDATARAREAGADCAVAVGGGSTTGLGKA-IALETGPIVAIPTTYAGSEVTPVLPRTVIYDPALTVGLPRGLSVTSALNAIAHAAEGLYARDANPVSLAEEGIR |
4 | 1m1jE | 0.06 | 0.06 | 1.00 | 0.55 | EigenThreader | | QEKTVKPVLRDLKDRVAKFSDMELHYNYIKDNLDNNIDSLHKKIQKLENAIATQTDYCEDIYRKGGETSEMYIIQPDTTPYRVYCDMENGGWTLIQNRQDGSGFGNIKKYCDTPGLGNDKISQLTKIEMEDWNGDAGNALMEGASQLYGENRTMTIHNGM |
5 | 2hvrA1 | 0.19 | 0.16 | 0.81 | 0.33 | HHpred | | -AREKIHGTNFSLTCAKRTGPILPAEDFFGY--EIILK---------NYADSIKAVQDIMET---SAVVSYQVAGPGIQ-KNVDYG--DKDFYVFDIIVTTES-------GDVTYVDDYMMESFCNTFKFKMGRGKFEELIKLDLDSVVQDYNFT----- |
6 | 3ndiA2 | 0.15 | 0.09 | 0.60 | 0.58 | MRFsearch | | -------------------------MATLRAFAGNVVKI-------------RDELTALLHRLRAE-GRSVVGYGATAKSATVTNFCGIGPDLVHSVYDTTPASAFSDPYPDYALLFAWN------------------------HAEEIMAKEQEFHQA- |
7 | 6vq6G | 0.13 | 0.12 | 0.93 | 0.44 | FFAS-3D | | ------SGVDLVTYITRFQWDMAKIKQSLKNISEIIAKGVTQKSRASAYNNLKGNLQNLERK---NAGS-LLTRSLAEIVKKDDFVLDSEYLVTLLVVVRSSNVLSEDQDSYLVTLFKKAVDDFRHKARENKRDFQYNEEEMRADKEEMNRLSTDKKK-- |
8 | 1xizB | 0.08 | 0.07 | 0.84 | 0.56 | SPARKS-K | | --------AMQDIHFRRHRHLPKEVSQ------NDIIKALASPLINDGMSDFADHVITREQNGLPVEPVGVAIPHT--DHKYV------RQNAISVGILAEPVNFEDMGGEPVFMLALNVLGWIMDVIQ---DEDFMQQLLVMNDDEIYQSIYTRISERG |
9 | 5a0qI | 0.11 | 0.07 | 0.70 | 0.54 | CNFpred | | --------------------------ADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFR-GAALVLGGVDV-----------TGPHLYSIYP--HGSTDK---LPYVTMGS-GSLAAMAVFEDKFRPDMEEEE----AKNLVSEAIAAGIFND |
10 | 5h7iC | 0.05 | 0.04 | 0.82 | 0.83 | DEthreader | | VILNRVSDLLKNYANKALDLAGLGQYFLCIYRLFKLGLFFAQLVSAELQDC-IS--SH-YA-TKLTRY---LTI----------F-----PCAKIRYKPTTDSVSIDEPDCLLF-----HTGTLLATTSPLQIDRLDMKFVKELFTVCETVLSLNALRSG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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