Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MTKHYKIIGLRILSWVITITGLIIFIGNVHEYGLHFTYNQVLAIIIVILLLVTTMYFSVTPKLLKWNEKYELVWWLCYLCAPIYLFLTNLYNSTDLGYTIKFWLFFGGGAALIIISKYILKNKK |
1 | 4uosA | 0.11 | 0.11 | 0.98 | 1.17 | DEthreader | | GDNEVKKMLEKMIEEIKKMLEKAIKVKEMLEKMMAEKLKMVIELAEKILKKAKEMAEKILKKVKNEEVKKML-EKM-IEEIKKMLEKAIKKEMLMAEKILKMVIELAEKILKKAKEMAEKILKK |
2 | 5k7vA | 0.11 | 0.11 | 0.98 | 1.33 | DEthreader | | -HTTDKFMAAAIEAIALLATLAILAIALLASNHTEFMAKAISAIAELAKKAIEAIYRLADNHT-SPTYIEKAIEAIEKIARKAIKAIEMLAKNITTEYKEKAKSAIEIREKAKEAIKRLEDNRT |
3 | 3jbrE | 0.09 | 0.08 | 0.93 | 0.64 | DisCoVER | | M-EPKVRVTLFCILVGIVLAMTASDHW--AV--LSEFTTQKEYSISAAAISVLGFLLMAFRKKRDYLLRPASMFYVFAGLCLFVSLEVMRQSVIYYY-SWSFAACAAFVLLFLGGISLLL--S- |
4 | 5owvC | 0.10 | 0.10 | 0.97 | 1.17 | DEthreader | | ALDENQLFVGIFDRLLNQFQSYEKHLLLAYENFLIKMLKDFINILEREILLFKAEFS-NIQK-SDKNFSE-L-AFCNASDEYFLKDFKELLKSIIAKNFLEQSQNLIQEKNKFLDLKKAELQKR |
5 | 6t15c | 0.06 | 0.06 | 0.98 | 0.43 | CEthreader | | EAVQPTELPLLNTIILLSSGATVTYSHHALIAG--NRNKALSGLLITFWLIVIFVTCQYIFYAGTGLHFLHMVMLAAMLGVNYWRMRNYHLTAGHHVGYETTIIYTHVLDVIWLFLYVVFYWWG |
6 | 5doqA | 0.06 | 0.06 | 1.00 | 0.65 | EigenThreader | | DPIVAMFTKVAHVLATSYMTSAFVLASIAAWHLWKGNRALHLTMKTAFIFSVASALVGDLSGKFLAEYQVTGVTIGVFLMVVAAVYWLGSIWTAKNWFFGLLVAGGPLAMIAIEAGWYLAEVGR |
7 | 6wxrA | 0.21 | 0.19 | 0.93 | 0.35 | HHpred | | ----HRLIASTAIILT--VLHSAGHVVNVYLFGFPQKYYWVPGLTGVLLLLALAMYVFASHHFRR--RSFRGFWLTHHLYIFLYILLI-IHGSFALIQMPRFHIFFLVPAIIYVGDKLVSLSRK |
8 | 1mhsA3 | 0.16 | 0.15 | 0.98 | 0.27 | MRFsearch | | --NLPKLWGMSVLLGVVLAVGTWITVTTMYAQGEVQNFGNMDEVLFLQISLTENWLIFITFWSSIPSWQLSGAIFLVDILATCFTIWGWFEHSTSIVAVVRIWIFSFGIFCIMGGVYYILQDSV |
9 | 4hkrA | 0.15 | 0.13 | 0.87 | 0.79 | FFAS-3D | | ---QLSRAKLKASSKTSALLSGFAMVA-MVEVQMLIAFAICTTLLVAVHMLALMISTCILPNPHERLHWYIETAWAFSTLLGLILFLLEI--------AILCWVKFAWSATVVLIPVMII---- |
10 | 4ryiA | 0.09 | 0.09 | 0.94 | 0.81 | SPARKS-K | | KPSWTPPGMTIGMIWAVLFGLIALSVAIIYNNYGFKP-KTFWFLFLLNYIFNQAFSYFQFSQ-----KNLFLATVDCLLVAITTLLLIMFSSNLSKVSAWLLIPYFLWSAFATYLSWTIYSIN- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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