Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MFPLNDLSLKTQPVQLNKVTSNTESTIKQHELVSDDAIINELSSELVSCLGNGKFTPISEDSKLFNMLSEFKLLHSEYFEWGDYSLWFQDFSIYNKIGFIMIEKIRELVTHPFGIN |
1 | 4ar8A2 | 0.08 | 0.05 | 0.63 | 0.65 | DisCoVER | | QYDKFDTYNLKATYTL--SS--N--------------------------------KGEISNWNYMNKINEALNKLDNWGGYKTVTAYFSNPRLNNEVVYDIVFHG-----L-LSH- |
2 | 4k35A | 0.07 | 0.06 | 0.81 | 0.83 | DEthreader | | -DDLFARSASETE-LS-PVE-WLPLLAIHLDPALKAWTEALIRDVNAFNWDWFGHSWAESVPESVNFYWGAKLWGLAT-GNTPTKLLQVKTYWQLEYIR----------------- |
3 | 3s5tA | 0.07 | 0.07 | 0.93 | 0.59 | CEthreader | | --------KNTGALEFDSIQVNETINFAYPVKSTDNKLKDSLNSYFIAACFGEGYIGEKPAQVVKEYTEHYVKEYRTDLESYYKGIESHVQLYYKNLLVYRINYNEYTGGAHGIYT |
4 | 6hr7A1 | 0.07 | 0.07 | 0.96 | 0.63 | EigenThreader | | TIDEKEAMKKNIPLGFAGPLKYANGEFYVPLATTELVASVNRGCSIVTKC--GGAEVFLKEEEIKKYLAIEQVNMYKNLEGSLGITVAECTE---DGVYFSVTLPDVPVGTVGGGT |
5 | 3s5tA1 | 0.11 | 0.10 | 0.97 | 0.23 | HHpred | | ----NTGALEFDSIQVNETAHLFGDTFAYPVKSTDNKLKDSLNSYFIAACFGEGYIGEKPAQVVEHYVKEYRTDLESIGAWYSYYKGIESHVQLYYKNLLVYRINYNGGAHGIYTT |
6 | 2eg5E1 | 0.12 | 0.07 | 0.59 | 0.40 | MRFsearch | | -----------------------NSAYNQLVLAKVKPVLEQCVRELLRANLNKCIKVADGPNTLLTVRDIVQSIDKVGQLRPTIQIFLNDL------------------------- |
7 | 5l0wB | 0.12 | 0.09 | 0.73 | 0.42 | FFAS-3D | | TFTFIPLHIDPKSKAISAAPNALGTPSANKALETELAALNALHRALHTQIEGPIPVPPPPNPKRSANINKLRESGNAEYRKQRYG------------------------------- |
8 | 3s5tA1 | 0.12 | 0.11 | 0.97 | 0.64 | SPARKS-K | | ---KNTGALEFDSIQVNETFGDTAKPACNLTISTDNKLKDSLNSYFIAACFGEGYIGEKPKEYTEHYVKEYRTDLEPYGAWYSYYKGIESHVQLYYKNLLVYRINYNEYTGGAHGI |
9 | 1y89A | 0.13 | 0.08 | 0.58 | 0.50 | CNFpred | | -------------------------MINHKIFPTADAVVKSLADDMLAYSQQPVHISLSGGSTPKMLFKLLASQYANDIQWKNLHFWWGDER------------------------ |
10 | 6li0A | 0.05 | 0.04 | 0.82 | 0.83 | DEthreader | | PET-VVILLTLIIGNVIFHCA--PLLHSI--------DL-VG-VSCLV-PT-LSLLSTHESLTCQVFGYIISVLKSVSMWCL------GYHDIFECAFTWLSNCNIYALSDFRLRR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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