Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MSEVPRFELRSKRKIGKKQKVDIFGDKDDESMLQIDCETDSLISESVSSTHSYEDYSKAYKELTLETPADVNDSASTIVDSVCEESWYDKTIKDEQTKEDKKTDKKLKRIEKVKENNQNDSMSLQIAQLSLRIQRIESETKLKTLDSAYNTIITQADNLTTPQKKSLISAILATMR |
1 | 6fszMM | 0.06 | 0.04 | 0.62 | 0.61 | DisCoVER | | VTHA-LQPGRL----------VEISVNGKDNYGW-------GA----------------V--VDFAKRTDHESYIVNVV--VNTMYIDS-PVLKPFNPTLPEGIRPAEKSI-CA-------VI--PI--TLD--------------SIKSIGNLRLYMPGQKETVGKSLGIPVLD- |
2 | 6nplA2 | 0.06 | 0.05 | 0.78 | 0.83 | DEthreader | | --------------TLVIGFKNDWRGDIKEVETYINLIHAGVVILLTLLIPY-IR-VFIGGTVLGDINTKPKSEGLTEFAE--MIEPYKLRE--MQEAA--------W-ITDNEL-ELYKAKGNRQIRLNELLKEHSS--TANLI-V---MSM--PLARVSALYMAWLDTLSKDLP |
3 | 4zh0A | 0.16 | 0.16 | 1.00 | 0.57 | CEthreader | | VGYVTQCGGNANGQKSISSKTIFNNEPGYRSTSITCSLNGHSPGYYGPSIENFKKLNEAYQILQYTCSGDGNNNCSSQVTGVNNQKDGTKSSKVVDSRADGNTTGVSYTEITNKLEGVPDSAQALLAQASTLINTINNACPYFKICGAFSEEISAIQKITDAQELVNQTSVINEHE |
4 | 5svaN | 0.06 | 0.05 | 0.75 | 0.60 | EigenThreader | | QALDAVRMRLAQLTHSLRRIRDEPQWYTLQSQLNVTLSQLVSVTSTLQHFQETLDSTVVTLLRKKNIPEVDEWMKYVRETSGVTTALLKDEEI--------EKLLQQDREITNWARTTFRNEYGP--------FNVDDVLKFTFTGEK---------------------------- |
5 | 6prkA | 0.11 | 0.06 | 0.56 | 0.26 | HHpred | | --------------------------------------------EMILQSETAENYRNCYKRLQEDEEAGRRSFIKIK--------------------------EQYEDV-QRFGKPDYREISRKMREIKRELDLNDKVADFKRAENELQSILDEVSVE-------IGTAVSEHVK |
6 | 3oa7A | 0.12 | 0.07 | 0.58 | 0.45 | MRFsearch | | --------------------------PEEHEDILNKLLDPELA---------QSERTEALQQLRVN--------------------------------------YGSFVSEYNDLTKSHNTLSKELDNLRSRFGNLELQSRPDISAEECNFLVEQIDSANLTTLQNTVKEIVLAV- |
7 | 4hwiB2 | 0.15 | 0.06 | 0.40 | 0.53 | FFAS-3D | | ---------------------------------------------------------------------------------------------------------QEKRFLEMRKIAKTEKASKAISDISLEVDRLGGRVSAVTVIELLMNELIKLDAIVALQRKMQVKRVQNYVE |
8 | 1ls4A | 0.11 | 0.09 | 0.80 | 0.74 | SPARKS-K | | -----------------------------------RPDAAGHVNIAEAVQQLNHTIVNAAHELHETLGLPTPDEALNLLTEQANATSLKQEAEKHQGSVAEQLNAFARNLNNSIHDSLNNSLQSALTNVGHQWQDIATKTQASAAWAPVQSALQEAAEKTKEAAANLQNSIQSAVQ |
9 | 2dgjA | 0.12 | 0.07 | 0.64 | 0.49 | CNFpred | | ----------------------------------------------------ANTLDGAMNSLQGAIKDATLRNQNYLDADESKRNAYTQAVTAAEGILNKQTGGN-----------SKADVDNALNAVTRAKAALNGAENLRNAKTSATNTINGLPNLTQLQKDNLKHQVEQAQN |
10 | 1g8xA | 0.06 | 0.05 | 0.91 | 1.00 | DEthreader | | -TSDKDQYLNSGMFFGLDSTIKYEEPTEFGV-THYGGERITKGFPQRAGQLARIEEARQLRLIKREPFVAP-LTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIVLLQKYNRILKKLENWATTKSVYLGS-N-E--TG-DSI-TAVQAKLK--N----AFDGECQ-LKSAEYKN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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