>PF17535 (220 residues) MNNTKNKSDWQLFLEDYRFYHEKEFDWITYLNHCLNSYPDFDILNFIRKYGPECEKSFLS LQSKTKADVYGVFTKQIKAGSVNEVLAQKLVQLDALRTNYLIGALYSTNKTQKKLFKQSW KNAKKQGYTKQEWLMTLVGLPFEKGEYHKQLYAHSRQEILDLVEAVKKLYLRPEKDDKLE FADSSKVSESKSIKVTNAVTLPSDDLDKELFEFSGEGGDE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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Seq | MNNTKNKSDWQLFLEDYRFYHEKEFDWITYLNHCLNSYPDFDILNFIRKYGPECEKSFLSLQSKTKADVYGVFTKQIKAGSVNEVLAQKLVQLDALRTNYLIGALYSTNKTQKKLFKQSWKNAKKQGYTKQEWLMTLVGLPFEKGEYHKQLYAHSRQEILDLVEAVKKLYLRPEKDDKLEFADSSKVSESKSIKVTNAVTLPSDDLDKELFEFSGEGGDE | |||||||||||||||||||
1 | 1yyuA | 0.07 | 0.05 | 0.69 | 0.57 | DisCoVER | -----------------AYNKAAHHFAQPRQQQL------------L--KVDP--KRLQASL-QTIVGM---VV-YSWAKVCMADLSIHYTYTLVLEDSHPWWALVNEHFPNV--------------LHFGPSTDFFEGCEFGGFPGSHDYPQFLRRMN--GLGHC---VG------ASLWPKEQNEVMDTIECFMGYWHDRY-WA----YPPVAQLAN- | |||||||||||||
2 | 6eu6A | 0.05 | 0.04 | 0.74 | 0.83 | DEthreader | -------ACMVFLMQL----------NAISIALRN-----LVDTLITFINIAGTAFIVAIIYPIFGHWAWGWLKELG----FIDFA-GATVVHSIGGWFAM--R-GLHNPLATLGTFFLWFGWFGGLVI-NTN-AA----SAGVSALEASLAIESAIAVHGVG-GVI--T--------L-CVAIFAQKSYLLRQLQALGVAWFGLGMLFF------R--- | |||||||||||||
3 | 6au8A | 0.07 | 0.06 | 0.90 | 0.54 | CEthreader | SVEKGDYYEAHQMYRTLFFRYMSQSKHTEARELMYSG-----ALLFFSHGQQNSAADLSMLVLESLEKAEVEVA-----------------DELLENLAKVFSLMDPNSPERVTFVSRALKWSSGGGKLGHPRLHQLLALTLWKEQNYCESRYHDGEGCANMLVEYSTSRGFRSEVDMFVAQAVLQFLCLKNKSSASVVFTTYTQKHPSIEDGPPFVEPL | |||||||||||||
4 | 4ui9C | 0.07 | 0.07 | 0.99 | 0.70 | EigenThreader | QVKNEALRELRVELSKLHQARELDGFGLYLYGVVLRKLDLDVFVEATHVLHWGAWLELCNLIEEALQKYQNLIDVGFSKSSYIVSQIAVAYHNIRTCCVIGNYYSLRSQHEKAALYFQRALKLN---PRYLGAWTLMGHEYMEMKNTSAAIQAYRHAIEVNYRRAHQLRPNDSRMLVALGECYEKLNQLVEAKKCYWDVEKMALVKLAKLHEQLTESEQA | |||||||||||||
5 | 1vt4I3 | 0.08 | 0.05 | 0.60 | 0.39 | HHpred | ---------------------------------------EYALHR--------------SIVDHYNIPKTFDSDDLIP-PYLDQYFYMTLFRMVFLDFRFLEQKIRH-----------DSTNASGSILNTLQQLKFYK--P----YICDNDPKYERL-VNAILDFLPKIEENLICSKY------------TDLLRIALMAEDEAIFEEAHKQVQR----- | |||||||||||||
6 | 6iknA | 0.14 | 0.10 | 0.75 | 0.50 | MRFsearch | ----SLGEAWAQVKKSLADEAEVHLKFSAKLHSEV-----EKPLNFRENFKKKCDHHIADLRKQLASRYASV---------EKARKALTERQKDLEKTQQLEIKLSNKTEEDIKKARRKSTQAGDDLRAQSKWFEEVTT---------------IRQHLCQYTQLRHETDFNQSTVEPVDQLLRK------------------VDPAKDRELWVRE---- | |||||||||||||
7 | 2gs4A | 0.14 | 0.10 | 0.67 | 0.69 | FFAS-3D | ------KTIEDVFIHLLSDTYSAEKQLTRALAKLARATSNEKLSQAFHAHLEETHGQIERIDQVVES----ESNLKIKRKCVAEGLIEEANEVNEVRDAALIAAAQKVEHYEIASYGTLATLAEQLGYRKAKLLKETL-----------EEEKATDIKLTDLAINNVN---------------------------------------------------- | |||||||||||||
8 | 4uosA | 0.12 | 0.10 | 0.80 | 0.69 | SPARKS-K | GDNEEVKKMLEKMIEEIKKMLEKAEKMIKEIKKMLENEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVELGNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVG-------------------------------------------- | |||||||||||||
9 | 1h6kA | 0.09 | 0.08 | 0.89 | 0.55 | CNFpred | KSACSLESNLEGLAGVLEADLPNKSKILRLLCTVARLLP-TTLVGLLNARNYNFGGEFVEAMIRQLKESLKAN--NYNEAVYLVRFLSDLVNCHVIAAPSMVAMFE-------NFVSVTQEEDVP--QVRRDWYVYAFSLPWV----GKELYEKKDAEMDRIFANTESYLRQKTHVPMLQVWTADK-----PHPQEEYLD----CLWAQIQKLKKDRWQE | |||||||||||||
10 | 2qj0A | 0.07 | 0.05 | 0.79 | 0.83 | DEthreader | IQRAILALLLNAFKIDGFFADYSCDFERTILGPILRLFIVDKLVRGSLNSRT-DISYFAHIANKN-HLRRA--DHP--P-FKELSSNGF-SNITL-LL--------------------------------V-RFSQ--PFLDISYKIKIDISDFFTLTYLHYGLGGTLSFEEKGSEIKALKEEIVITAQLSKEKLKTERFQ--LYISKYQTSPIFNPRLS | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |