>PF17530 (220 residues) RLTDLHKPSCEPKGLSFYAYKAFIPYREKLSKEWNKLPVCIKDQEVDIKQEVKEDQLIRK IYKWDSVFDSWNWSKGYKLPKPLYELLEIYMKLWKLDNRTTYPDWGESSMIFKCYRYIRN KRMEDIENLSTEEFNDSNFNGWPKTMWYICRNCFDNGIVINNNSNDYYYTCDFSDNPTLL HYTDYFYYILNNDYWCYDCKYTPLFTLTTLFCLESINDSE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | RLTDLHKPSCEPKGLSFYAYKAFIPYREKLSKEWNKLPVCIKDQEVDIKQEVKEDQLIRKIYKWDSVFDSWNWSKGYKLPKPLYELLEIYMKLWKLDNRTTYPDWGESSMIFKCYRYIRNKRMEDIENLSTEEFNDSNFNGWPKTMWYICRNCFDNGIVINNNSNDYYYTCDFSDNPTLLHYTDYFYYILNNDYWCYDCKYTPLFTLTTLFCLESINDSE | |||||||||||||||||||
1 | 2dlaA1 | 0.08 | 0.04 | 0.47 | 0.62 | DisCoVER | --MIMLDPFSKAKSINDFMD---------------AIPKIV-------------------------SVDDV-----------IERIRVVIDKFL----DQDNVMDLAQFYALLGAL---------------------------------S--YS-------------YGIELL-----VKKANLIIYSERLEEISLYEIRLPFYRKVLEIQFA------- | |||||||||||||
2 | 1wgzA2 | 0.07 | 0.05 | 0.70 | 0.67 | DEthreader | KRPDTSILHR-------PTAHPFEIAVRITT--Y--YEDFFNAG----T--L--M-GHALYEGLAVSLGV----------HE-SQSRTWENVGSLGFELEFHFAVNAVDEVTYNLHIVRL-ELELALFPLPEAWAEKYHLGVAPKDGV--MQD-V---HWAGGLFGYFYTNLAAQFFAL-F--------------------------PRLV-VTEPSARL | |||||||||||||
3 | 5zxlA | 0.02 | 0.02 | 0.95 | 0.56 | CEthreader | VIVDTKIVAGAPARLLAAGIGDALATWFEARACSRSGATTMAGGKCTQAALALAELCYNTLLEEGEKAMLAAEQHVVTALERVIEANTYLSGVGFESGGLAAAHAVHNGLTAIPDAHHYYHGEKVAFGTLTQLVL----------ENAPVEEIETVAALSHAVGLPITLAQLDIKEDVPAKMRIVAEAACAEGETIHNMPGGATPDVYAALLVADQYGQR | |||||||||||||
4 | 6x80A | 0.08 | 0.07 | 0.91 | 0.67 | EigenThreader | RLSSGLRINSAADDASGMAI---ADSLRSQANTLGQAISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQDGQSLQADINKLMEELDNIANTTSATQSSKI---GVTRFETGAQSFTSGVNYNGIEVV-----ISTSVGTGLGALAEEINKSDGRGILANQKENYGLVKNDGRDINIS-----GTNLSAIGM---GTTDMISQSSVSGFSRGSGFS | |||||||||||||
5 | 1vt4I3 | 0.15 | 0.09 | 0.60 | 0.49 | HHpred | --------------------------------------------EYALHRSIVDHYNIPKTFDSDDLIP-------PYLDQYFYSHIGH----HLKNI--EHPERMTFRMVFLDFRFLEQKIRHDS--------TAWNASGSILLKFYKPYICDNDPK----------YERL---------VNAILDFLP-KIEENLIC--SKYTDLLRIALMAEDEA-- | |||||||||||||
6 | 4czwA | 0.10 | 0.06 | 0.66 | 0.35 | MRFsearch | -----------------HYTPLLRNALQHAATACL----------ADPCLLCELGYVFDLQKGNLRALNHTSNASVSTLVKNLTFLFDKIRTLFKLNQPPNPLDLVKRLLETDARYQIKC----------------------------------------VSPRTATTFVNKLCYPAQRITFSQVLKAGLENKGYCTKCQRYQNLDQRKIIF-------- | |||||||||||||
7 | 6em34 | 0.14 | 0.11 | 0.82 | 0.46 | FFAS-3D | --NFVKQLSSNNRKTRVNALEALKKYLIEFNKLWKGLYYAMWFSDRPRPQQRLANELGELHGLYFKVMCF-EWFNIDRYRLDKYLLLRVLFSQLKYLQSR---NWDKKLV------------DEYIKKVLRWLPLSGSPKVYTGIPIHIV------DILLDE------WERLLAKKTPLADVIAIFQDIVADYN-----NSKVLRE----KIKEDLFSDT | |||||||||||||
8 | 5tscA | 0.12 | 0.10 | 0.90 | 0.54 | SPARKS-K | -----------EKT-GLHVHEKIKHMVKNYGTMITGIPILGQNEAEISVGYVKMKENIAEVVRKSEMTQPTNSA--GKASNEVCDLLLGTEGASEFEKSGDGSNLLPNKNLLVRVEMDRFNAPQKYQKIKREEFNPETAEKNEDQLVYLCHRLFNAITT--PFYQNYILYDYIDPEES--AEEAAMFEMGEIDCW----TATHSFTIFVPESDSEDTRTL | |||||||||||||
9 | 6r1iA | 0.09 | 0.07 | 0.74 | 0.64 | CNFpred | -------------HAIIAGRMLLGGLIEYMQANPGKHGSAVGC-----NPDLHWTKFFFKFCHYPQVFD-LDYK-DATLPSCAFRIVKHLERLIGDERVTRYIETIRHSRHVFGNETYEMIGG----NPSGCVGTSII---NTIINNICVLSALIQHPDFSPESFRILVIYGCDPPIHPSFIKEFYDRYT------------------------------ | |||||||||||||
10 | 2f7fA | 0.07 | 0.05 | 0.72 | 0.83 | DEthreader | -----GYAIFAGLERLVNYLENLT-FTESDIAYLREYPEDFLTYLANF--EF---KC--TV--RSALEGDLV-FNNEPLIQIECQLVETAL-----------LNMVNFQTIAKALEFTLVRIDISKRVRELDFTEAKIY----A-S-DLDE----NTILNKMKSKIDVWGV------------------------GTKLTAYD-QPALGAVKVTTPGHKL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |