Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | SECELGYDERRCCRQEPDAHCCDREHRKFWKHPPEFPHFGKCKGRHALPFPRMEHWPGPKHCPFLSEKDMKDLPVTVHHGCMPIVAHGVVMFHIVSETKPSITISNTGAIKVEANGIQLLSASLKEKYPVDKVVASYANKIATIRIPCDAAFSESPVDIPI |
1 | 3w1zA | 0.06 | 0.04 | 0.61 | 0.65 | DisCoVER | | ---PP----------------TV--ND-LF---SDFVSYSNQIP--GELS-----P-----SIDVH---EG-KDTVSVD--VELPGVKEDVQVHYDSGKLTISGEVVRFGSFSRTIT----------------IP--AKIDARIEANFSNGLLTVTLPKV- |
2 | 2fj0A | 0.06 | 0.04 | 0.78 | 0.83 | DEthreader | | YSFRVAQEDSDHGPEVSDVIVITF--NYRAGLRDVTLLWVQ-NAHFF-GGRPDDVTLM---GQSAGA-AATHILSADFR-RAI-L---MSG-----------TSSSAFF-PELIAKGRK-SMYPA--ISLAIKRARSNG-APVYLYQHDLFIFYS------ |
3 | 3czjA2 | 0.06 | 0.06 | 1.00 | 0.66 | CEthreader | | IPHLTTSEMDFCIELGNKRWQFNRQSGFLMWIGDKKQDIGVSEATRIDPNAWVERWQAEAALLQCTADTLADAVLITTAHAWQHQGKTLFISRKTYRIDGQMAITVDVEVASDTPHPARIGLNCQLAWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYV |
4 | 2bixA1 | 0.06 | 0.06 | 0.99 | 0.62 | EigenThreader | | GPGLLHPFDGDGMVTGDGRVVRTQGYVEEQKAGKMIYRGVFGSQIANTFGLPYLFGLRGAGECEIKRIPVQAGFVFHHAN-AFEENGKIILDSICYNSLDPGLMVS-RCCEFPVVHPYMGAAHHGNAPLQAILKVDLESGTETLRSFAGFAGEDITAPAIA |
5 | 6qpnA | 0.25 | 0.16 | 0.63 | 0.30 | HHpred | | ------------------------------------------------ENDRRTLWTTPDPCKVSEEKDSKLTLVLTKCGSQ---ILASVSLLVVKGKFANINNKTNKKFSFDANGKLLTGSSLGNYWKNDSVIGPYENKPVATTISFNKET--------- |
6 | 6oiuA1 | 0.14 | 0.06 | 0.40 | 0.45 | MRFsearch | | -----------------------------------------------------------------------------------TKVTSTLTMHRREQTPTDLVLDGLELESVELDGNALSMHSTETQKGDKRVYSLDVDGRLVIAAD-------------- |
7 | 4bxsA | 0.15 | 0.12 | 0.84 | 0.30 | FFAS-3D | | KSCR--VDNGNCCKHVQNDIQCS-----------------CAEGYLLGEDGHSCVAGGNFSCGRNIKMDCGECPAALVDEKEGVFCGGTILSHCINETETISGEIDKLSVDKIYVHKKFVPPQKAYKFDLA----AYDYDIAIIQMKTPIQFVPACLPT-- |
8 | 6t1rA | 0.12 | 0.10 | 0.83 | 0.62 | SPARKS-K | | ---------------MDVTIQHPWFKRTLGPFYPSRQFFGEG-LFEYDLLPFLSSTISPYYRQSLFRTVLDSGISEVRSDKFVIFLDHFLTVKVQDD---FVEIHGSREFHRRYR--------LPSNVDQSALSCSLSDGMLTFCGPKIQDATHAERAIPV |
9 | 2o30A | 0.09 | 0.04 | 0.40 | 0.65 | CNFpred | | ---------------------------------------------------------------------------------TWDQELNEINIQFPVT-AIKIRMV-GKKICVKNQGEIVIDGELLHEVDVSSLWWVINGDVVDVNVTK------------- |
10 | 5xjcQ1 | 0.11 | 0.09 | 0.79 | 0.83 | DEthreader | | WYSP-SSKALMSCCMVEKAWFFFFKILKAALAETDSLHEQTVLLLFLDCFLERQISLPMWMGLQLALELELKKTL-----L-I-DKHYCFLMLERRW--NTI--------LDD---SHLLHCSLVEHSQLDMLFYTGFEIND-------------EFELSR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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