Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MTDNYSINMQRINKVIPNTLVTDVFKRTLKKLQDRISQIIVNDGQDGKEILMTSIHNFYRYANGEMTLYKKDSVKKVEFVKGTPHGKVIIKFYDFSDLKLNDIVYGRAFDFIQDIKPKEINHAGYDNTIRGEFPQLLDPDHAEEIDRLRRWMQDGHISHYEYDDANPVYPKAGK |
1 | 4gopC3 | 0.03 | 0.02 | 0.69 | 0.65 | DisCoVER | | ----------------------------------YEFVRILEVEA-NQQCDVIGILLSEIVSKASQRPV---QKRELTLVGNRSV--KLTLWGKTAETFPTNAGVDEKP-VL--AFKGVKVGDFGGRSLS-MFSSTMLI----NPTESHVLRGWYQFQP-YTNGGAGAN----- |
2 | 4n48A | 0.09 | 0.06 | 0.70 | 0.67 | DEthreader | | ----------------AAMKMANMDFVFRMFPRDS--------------------LYFAYVLWRKKAKG---FG-MTLK--------NDFKLSEFEPMADGGFLLLCQFLMALSIVGHFICKTFDLTFSVVYLYCCFEGLKVG-IDDVRDYLFAIKLVLVVVIDEFDYMI-N-- |
3 | 2hthB | 0.08 | 0.05 | 0.59 | 0.74 | CEthreader | | ---------------------RFVWTSGLLEINETLVIQQRGVRKFDAGTLLLSTHRLIWRDQKCCMAILLSQIVFIEEQAAGKSAKIVVHLHPKNSYIKLSFKEHGQIEFYRRLSEEMTQRRW-------------------------------------------------- |
4 | 3gvjA | 0.06 | 0.05 | 0.80 | 0.67 | EigenThreader | | WRKTDLGLIPSVTEVHSN---------------NGFAMGYHQGDVAPREVGLFYFPSEPCIKYGVLLITRGTRGVGVGSVVVNYIYYMFGGEDHHPSDLYCYKMKIGP-------DNRVSRDFRYGAVPNRAVYGANNTDSR-------------RIVYNGDEHLFQSADVKPY |
5 | 4ztxA | 0.20 | 0.16 | 0.76 | 0.45 | HHpred | | ---------------------KNDFAEILQTAVKAL--------GSERVIVATSSHTPHTLASEKWFSFAVEKVKEVATLAKAVTEPEAVELEDPAVKRQAQVTHNRKAPFNTRYAKKHLSLPLFPTTTIGSFPQT------SEIRVQRNKFTKGEISAEEYERFIE------- |
6 | 4ifsA | 0.16 | 0.10 | 0.66 | 0.75 | MRFsearch | | ---DISLTLEEVEKRFMSGSLYEMVSRVMKALVNRKGAQCITCSYKASSGLLYPLERGFIYVHKPPVHIRFDEISFVNFARGTRSFDFEIETKQGTQYTFSSI-------------------------------------EREEYGKLFDFVNAK------------------- |
7 | 2lghA | 0.10 | 0.07 | 0.70 | 0.44 | FFAS-3D | | ----------SIEAHIEQE--IEAVWWAWND-PDCIARGSRVDLVVGGRFCHHMAAK----DGSAGFDF------TGTFTRVEAPTRLSFVMDDGREVDVQWVQETF----------DAETSHTPAQQQAG---------WQGILDNFKRYVEAAGLEHHHHH----------- |
8 | 6wxoA | 0.14 | 0.12 | 0.84 | 0.55 | SPARKS-K | | QGDILIVNAKD----------VDEMLKQVEILRRLAKQIAVHSSDGGDILIVNGGGMTITFRGDDLEALLIEMIFGATITLSLDGNDLNINITG-----VPEQVRKELAKEAERLKEFGITVTRTGGG-----------DVDEMLKQVEILRRLGQI-AVESDDW-RILQEALK |
9 | 5umsA | 0.20 | 0.11 | 0.54 | 0.62 | CNFpred | | -------------------MVSRVMKALVNRK-SGAQCITCSY--KASSGLLYPLERGFIYVHKPPVHIRFDEISFVNFARGTRSFDFEIETKQGTQYTFSSIEYGKLFDFVNAKK---------------------------------------------------------- |
10 | 4fd3A | 0.05 | 0.04 | 0.78 | 0.83 | DEthreader | | ----TGATRGIGKAIQK-FQ--------G-TKES-IERTAI-LSGLSQRQCAIAIYDGIEYFDRPPLKQKYSTLFDP------------CNK---WSNR-Y-----LLINPMTICIMMQR-SARPTIV-NISSILHSSASKAALSRFTEVLAAEMRNIRCFTISPGLVSIEVSL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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