Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MTSTVNLGSDTASKWTVIKSRCNSCCRILVSCAAVICAILALIFLVATIGLSVKLAFTVQEVHNCKQKLSGASTTTAAIYTTPSTMIEALQTNQLKLTTNERRSTPPDCLVEKKLCEGEVRYLKTKGCLGAREGEDLNCIDLVAECVGKPCGHNEDYKECICTNNGTATKCCYN |
1 | 5ewnA1 | 0.10 | 0.07 | 0.74 | 0.65 | DisCoVER | | ACILLNPVLVKDFVQALGA-QYS-MW-------KLKYLNVKLTSMVG-ASA-VN--GTV--LR--V--SL--NPTSKHLDVTVGKNATFKLKPSDLGG----------PRDGWWLTNLGPSIEHTLGTMSSYKNEQFTLFLVELASEWCFTGY---A-ANP----------NL- |
2 | 5doqA | 0.05 | 0.03 | 0.72 | 0.83 | DEthreader | | --------------------R-ILTELTLTVHIIYATIGVGVPLMIAIAVGYLLARRWTRGFVITVAVGVVTTIGLETFEALGYLVASASAMFITMV-----PT-AH-AT-YMTSFVLATMAFISVAGLMVVVYFLVAGGPLAMIAIEAGWYLA-------------------- |
3 | 3pieA3 | 0.05 | 0.05 | 1.00 | 0.46 | CEthreader | | AKLDSQALRFYPTQGGGGGGGGGGGGGGGKTVADWLSEARKPFVVVSLESDSLTKASMAAVESEIIKYVSLPDSSEQKKLAKVPREAILNAESSYVLLRSQRFHLGDRVMYIQDSGKVPLHSKGTVVGYTSIGKNVSIQVLFDNEIIAGNNFGGRLQTRRGLGLDSSFLLNLSD |
4 | 6pasB | 0.07 | 0.07 | 0.95 | 0.73 | EigenThreader | | AMEG---SFLVRQIYEDEITYNLITAAVEVLQDAILELFGKTFFEFCQDSGILQDFLQNLDGLHDHLGTLYRVFPFHLMFDRDLNIVQAGRTVSRLLPRVTRPGYDTVTLLFSGIVGITIGIHSGEVVTGHRMPRGNTVNLTSRCETTGVPGT------INVSEDPMQTWFLTR |
5 | 2lorA | 0.16 | 0.07 | 0.47 | 0.31 | HHpred | | ----VNLGLSRVDDAVAAKAACQS--HAFMKGFTFVGMAFGSLLVAVVAGSVVSYGVTRVESEKCNNLWLFLETGQLPKDRSTDQRS--------------------------------------------------------------------------------------- |
6 | 6r3qA | 0.21 | 0.07 | 0.33 | 0.48 | MRFsearch | | ------------SSLLDVLLSTTVFLILSITCAALAVFGAALLLEILSLVVSVRMVFFLEDVMTCTKRLL-------------------------------------------------------------------------------------------------------- |
7 | 6u8tA | 0.11 | 0.09 | 0.87 | 0.39 | FFAS-3D | | SASVAEYGGEVSFKYAQSKGEVYKEIVKHVDTQHGVSESTCAHWIANKVSNSIKKLQTEQQFKLTDNWLQEQGVVPKEKRDEVAGTVSKSDISALAILDTGSDTAGAKKIVSALVQGEKVVF------FDPNFGETFPSHQKFESWLKEAFWEKSGYA---------------- |
8 | 1yypA2 | 0.15 | 0.09 | 0.60 | 0.59 | SPARKS-K | | ---------------------------------------------RESENSAVHVDLDFGVVADLLKWIGP-TGTVQILVHAPAIKFILTNGSELEFTSN-----------------NRVSFHGVKNM-------RINFYQTLLNCAKLPCTTEHDTLLYVASRNGLFAVENFL |
9 | 4iwoA | 0.09 | 0.03 | 0.33 | 0.58 | CNFpred | | -------------DASMAKAITGVVCYACRIASTLLLYQELMRKGIRWLLIKDDYNETVHKKTEVVITLD-------------------------------------------------------------------------------------------------------- |
10 | 6bfiA | 0.06 | 0.05 | 0.78 | 0.83 | DEthreader | | ADQGKLLDGAGVINGMSDLLMCADRSEVRKMVKVCRSVQEYLDV-AKVIDICARDYVIKIVKEKWLAAESMGRSDRQVAKEVRSVIENWVP-----------------LPAEM------QEAE-ESLQMA------RKMAMMS-KYTRGEAVKASMGGDTLVNALRTV------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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