Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | RLPQLPEGLRTELHVVSHKGMTGNKSWVLRDLATDQAYELTPSTVAGWQIPVGDLSSPGIIVTMQPECIALELRTGQLYRTAPPPSSLRPAR |
1 | 3a0fA2 | 0.08 | 0.07 | 0.86 | 0.62 | DisCoVER | | LAV-NP--HWTDELWFGSR-T---QGLWRSTDRAQTWSRM-N--QLPD-SSTYGIGIISVIFDPNVGTAYVASHAGGLWVTWDGGANWSQ-- |
2 | 5uc0A | 0.05 | 0.04 | 0.79 | 1.00 | DEthreader | | --------PNGYILGEEGSGIGGLTYGEGTLYTGDHKTFWQ---G--P-SLGWFGQGSRV--LVYIVLVPIRT-GIGARGVNIGY--LKLSA |
3 | 2fp9A | 0.07 | 0.07 | 1.00 | 0.48 | CEthreader | | ATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAESSFVLVAEFLSHQIVKYWLEGPKKGTAE |
4 | 3gm5A | 0.04 | 0.03 | 0.85 | 0.58 | EigenThreader | | LDMRNTKPQWFWTDTKFNGRPTKARAKLAFFEP-LQLELIEPDENPSEELYRKGMKVIQKGDFE--GGRYAYITVMIELLY----------- |
5 | 4l1nA | 0.17 | 0.14 | 0.85 | 0.25 | HHpred | | ----SSNN--KFSACIEGKGEEGVGKIYIKNLKEQSKWELDLDQDIDW-FDDNNL---VVIVSQGGILYKVNIETGQATELYNKDNKK---- |
6 | 2ivzD | 0.14 | 0.10 | 0.70 | 0.53 | MRFsearch | | ----------SKLAYVTFES--GRSALVIQTLANGAVRQVASNGAPAFSP-----DGSKLAFALSLNLYVMDLASGQIRQV----------- |
7 | 5n5xA3 | 0.12 | 0.10 | 0.80 | 0.37 | FFAS-3D | | -----------QFAIIDIKG-----NWSIGRIPKNFNNQLDPEELSSWKRIEWFSHFQKILVFDRSKMIEIDFMNNWQTEVVQAKAWSNI-- |
8 | 2bklB4 | 0.10 | 0.09 | 0.90 | 0.60 | SPARKS-K | | ASLLSVSIVGGHLSLEYLKD--ATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTRQIYKTSVSTGKSELWAKVD------- |
9 | 1uebA | 0.19 | 0.12 | 0.63 | 0.59 | CNFpred | | --------ETRELQYLYPE----GEEMVFMDLETYEQFAVPRSRVVGAEFFKE---GMTALGDMYEQPIKVTP------------------- |
10 | 3nx1A | 0.12 | 0.09 | 0.75 | 0.83 | DEthreader | | ----------------KHDLSFVGKHLVYTYDNG-WNYEIYV-KNDNYIVRVG-E--SIYKISWTDVSLIVNLGDSLFHG-TDE-FATITFV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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