Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | MDQKRRRRIHALRPTTINAEVRPRRESLRRQLLSQLFFKRMAQLFKKKRQKKPSTVWYDKVAFPPSAWQGPARVSPYGYESDSENEEYTCISSASLNNVLTESLTPTQNATANNCSNTYSESPAVLHLERIPRDLRETDALDSEEVYLDGFVTTRSRSNSFENMGPVKRRLYSKKFCRQFAAINIILLMLNILVLTGIVYRGFGKGCL |
1 | 6ehqL2 | 0.07 | 0.07 | 0.90 | 0.71 | DisCoVER | | ----QRITIDPVGHLRIDCEIENGV--VS--KAW-ASGTMAWMIVQRTHALSSAAAWLTRGKGAVNYLSVPGGYIENARPITSHLGIQESAKHSWYKDEAPQAPGTTIPAGKYSWVKSPTFTVEVGANLHSTLGRIIKGVGFLEAPRGMLSHWMVIKGIISNYQAVVP--------S--TWN-SGPRNFPYEQSLVGTPVPNVVRTI- |
2 | 4l7tA | 0.05 | 0.04 | 0.73 | 0.67 | DEthreader | | YLGAYGMRALYFHLR-----S--KYGRYWSMAATQMLKGEVYLWSGQMGGGTADYTTAKTALQSIVSNANV-SLQDDF-K----KDNSEIFSIRNAYNM-NKYQGRSF--L-NDYP-YR--YADLLAEALGEDPT---------AEINQVRE-------FEAKA-LAYNDKYNYMKERMREFMEGKR-Y------------------- |
3 | 1vt4I | 0.04 | 0.04 | 1.00 | 0.66 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 1xmeA | 0.08 | 0.08 | 0.98 | 0.50 | EigenThreader | | VLDLWRRWKAANPG----KVTPLVTYMAVVFWLMWFLASLGLVLEAVLFTLFWWTGHPIVYFWLLPAYAIIYTILPKQAGGKLVSSLEFAGRLRGGGWIRALPWDNPAFVAPVLGLLGFIPGGAGGIVNASFTLDYVVHNTAWVPGHFHLQVASLVTLTAMGSMMIMAVGLHWAGLLVFNVLAGIVLLVALLLFIYGLFSVLLSRERK |
5 | 1g7vA | 0.15 | 0.12 | 0.86 | 0.34 | HHpred | | -------DINVDLPFVLFGGMN-VLESRD-------LAMRICEHYVTVTQK------LGPYVFKASFDKAN-RSSIHSYRGPGLEEGMKIFQELKGVKIITDVHEPSQAQPAFLARQTDTGAVINVKKPQF-VSPGQMGNGGNEKVILDGFGYDNLV--VDMLGFSIMKKVSPVIFVTHALQGGQVAELARAGMAVGLLFIEAH---- |
6 | 1vt4I | 0.14 | 0.07 | 0.47 | 0.35 | MRFsearch | | ---YSHIGHHLKN-----IEHPERMTLFRMVFLDFRFLEQKLKFYKPYICDNDPKYERLV------------------------------------------------------------------------------------NAILDFL-----------------PKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRG-- |
7 | 5k47A1 | 0.20 | 0.17 | 0.85 | 0.41 | FFAS-3D | | ------------------------REKYLKSVLRELVTRMMSQLFLDTPVSKTEKTNFKTLSSMEDFWKGVPRIKECYDVYSVSSEDRAPFGPRNGTAWIYTSEKDLNGSSHWGIIATYSGAGYYLDLSRTREETAAQVASLKKNVWLDRFSVYNANINLFWQFQPLKLIRYVTTFDFFLAACEIIFCFFIFYYVVEEILE------- |
8 | 5yfpD | 0.10 | 0.10 | 0.98 | 0.68 | SPARKS-K | | TALDFQRLFYNLLNVFNTANTFREKISYCILDLLNHFYNYYLGLFNSLIGTSDR----HLTRKIITAWLQNGILMDQEQKDETLFHEESIELFKEIPHFYQAGKGLSKSDLFNNLTLKKAINIDEVSQEPMLDADRLRSSWTFSESMDLNYSNPSSSPNLKILLDDKASKKFDETIDGFKTLKFKLITILRFNIRALCIYDIGSFFQN |
9 | 3hwcA | 0.13 | 0.04 | 0.32 | 0.49 | CNFpred | | --------------------------------------------------------------------------------------------------------------------------DSTTVFDNVFIPW--------EQVFHIGNPEHA-----------KLYPQRIFDWVHYHILIRQVLRAELIVGLAILITEHIGTSKL |
10 | 1st6A | 0.07 | 0.05 | 0.80 | 0.83 | DEthreader | | ----------DLTAPAVAAVLSLLTFDEAEVRKIIRVCKGILEYLTVAEV-VETME------DLVTYTKNLGLISKINR-FTV-KMSAEI-NEIIRVLQLTS---------WD-EDAWASKDTAELCAGK----------REILG-CKVNAARKEATNSEKVLCETRPVKVQAAIRGLVAEGRLMAMTQEVSDVSSAIDLGAIMAQKF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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