>PF17502 (186 residues) MDVFGRGRAATADDYRRFLERNSRAAAKLAAATTPVRTDSVISQPEAEERPRHRSLSRRN SVSSKDTHVVAGGDKHRDRPDRPSGTLVALAMAAQRRKSISRQEPLVNASASNTLRSSQR SRGEGRNSRSEGHSSSSSSYTQRSNSHGHRSESQYHRRKSITQSTSARLPQQQGHPRPRR NTLRHM |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MDVFGRGRAATADDYRRFLERNSRAAAKLAAATTPVRTDSVISQPEAEERPRHRSLSRRNSVSSKDTHVVAGGDKHRDRPDRPSGTLVALAMAAQRRKSISRQEPLVNASASNTLRSSQRSRGEGRNSRSEGHSSSSSSYTQRSNSHGHRSESQYHRRKSITQSTSARLPQQQGHPRPRRNTLRHM | |||||||||||||||||||
1 | 1ezwA1 | 0.05 | 0.04 | 0.75 | 0.54 | DisCoVER | ----------------VS--FG--IE------LL--PDDKPT---KIAHIKAEGFEYAWICDHYNYSYMVLTLAAVI--TSKIKLGPG--IT-----------NPYRHPLITASNIADGRAIIGMGPCKIPIWNPEAEDEVGPATAIREVKEVIYQYLEGGPVEYEGKYVKTTADVKARSIQIPF- | |||||||||||||
2 | 5nv9A | 0.10 | 0.08 | 0.72 | 0.67 | DEthreader | TL-S-YLSRLFSLSFLFHIGRVAIITSLLCIIYTWGGIEGVIWTDVIQGLLS-ANQFVVQRYIVTT-N-----IFAA----AQSSISSSLNSISSCFNSIYKVAKLVIIVAGIFSS-LAAIWLVL----------SD--WDA----------FNSLIG-LGGTGGSSVVIG--------------- | |||||||||||||
3 | 3e8wA | 0.03 | 0.03 | 0.99 | 0.52 | CEthreader | VLPVEKCNLEDSACMTSAFQQALPTFVAGLPDHGVEVMDVLDLDDFAFDLSGLQFTLKEGKLKGLKGAVIDNVKWDLKKKNIEVDFHLDATVKGHYTAGGRILILPITGDGQMKLKL-KNIHIHLVVSYEMEKDAEGVDHVIFKKYTVTFDDNAQFGLTNLFNGNKELSDTMLTFLNQNWKQVSEE | |||||||||||||
4 | 1w5cJ | 0.05 | 0.05 | 0.98 | 0.58 | EigenThreader | KRDRFVFVGWSGILLFPCAYLALGGWLTGTTFVTSWYTHGLASSYLEGCNFLTVAVS---TPANSMGHSLLLLWGPWCQLGGLWTFIALHGAFGLAPIAVFVSVFLIYPLGQNPFHMMGVAGVLGGALLCAIHGATVENTLFMLFVPVTGLWMSAIGVVGLALNLRFETFYTKNLLLNEGIRAWMA | |||||||||||||
5 | 2azpA2 | 0.16 | 0.09 | 0.55 | 0.28 | HHpred | VAGH--GQRLAGDNLDALTA----YTVAVQQALDDQDIGGAIDHIE-LFADDP---------HADSRNFVLCPGKAYDRS--PCGTGTSAKLALAADGKLLPGQPWRQASVIGSFEGRYEW----------------------------------------------------------------- | |||||||||||||
6 | 1ej5A | 0.20 | 0.05 | 0.27 | 0.35 | MRFsearch | --------AETSKLIYDFIEDQLEAVRQEMRRQGGSGGSQ-----------------------------------------SSEGLVGALMHVMQKRSRA-------------------------------------------------------------------------------------- | |||||||||||||
7 | 7abhT | 0.10 | 0.09 | 0.90 | 0.44 | FFAS-3D | -------NRFTVAELKQLVARPDVVEMHDVTAQDPKLLVHLKATRNSVPVPRHWCFKRKYLQGK------RGIEKPPFELPDFIKRTGIQEMREALQEKEEKIDIDYQKLHDAFFKWQTKPK---LTIHGDLYYEGKEFETRLKEKKPGDLSDELRISLGMPVPPPWLIAMQRYGPPPSYPNLK-- | |||||||||||||
8 | 6vq6a | 0.12 | 0.11 | 0.96 | 0.86 | SPARKS-K | RDLNPDVNVFQRVNEVRRCEEMDRKLRFVEKEIRKANIPIM-DTGENPEVPFPRDM-------IDLEANFEKIENELKEINTNQEALKRNFLELTELKFILFVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHFQGDQLKNRVKKICEGFRASLYPCPETPQERKEMASGV | |||||||||||||
9 | 4k0dA | 0.25 | 0.09 | 0.35 | 0.41 | CNFpred | -----------SGRILAAVPPFEKAAVALGTAVATGGDDSAIRAREATLPPMREELLSL------------------------LRTFGALQQAHDAGASH-------------------------------------------------------------------------------------- | |||||||||||||
10 | 4bedA | 0.08 | 0.06 | 0.78 | 0.83 | DEthreader | NLV--RKSVEHLTQETLDLQAARELQMGFQKIAAAAPASCVSIACC------------------WHYVMLPYWD-WTEPIQLP-LAA-PYWYRGNI-D---F-DKKTYYDFHHVDRIAYCHYDYDTLTPELKTLRSRARHPEKGFT--KHHQSA-------N-KRIEHLDPKDGGKSSNLDYAT-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |