Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | AKDGDVEGPAGCKKYDVECDSGECCQKQYLWYKWRPLDCRCLKSGFFSSKCVCRD |
1 | 2mi5A | 1.00 | 1.00 | 1.00 | 2.95 | HHpred | | AKDGDVEGPAGCKKYDVECDSGECCQKQYLWYKWRPLDCRCLKSGFFSSKCVCRD |
2 | 2mi5A | 1.00 | 1.00 | 1.00 | 1.10 | FFAS-3D | | AKDGDVEGPAGCKKYDVECDSGECCQKQYLWYKWRPLDCRCLKSGFFSSKCVCRD |
3 | 1jqiA | 0.02 | 0.02 | 0.95 | 0.83 | DEthreader | | YLAYSIGI-ASALGIAQASLLMAALSARTWRAESMLASATIHAQILGAEYYAT-- |
4 | 3r2uA1 | 0.06 | 0.05 | 0.93 | 0.83 | DEthreader | | KQASYLIGCQGEAMAAYVSGEVQH-DDI-YVGNI-KLKVLHTPG-HTPESISFLL |
5 | 1kozA | 0.13 | 0.07 | 0.55 | 0.57 | DisCoVER | | ----CV-RFWGKCSQTSDCCPHLACK--SPRNIC----------------V-WD- |
6 | 1jqmB3 | 0.02 | 0.02 | 0.91 | 0.68 | MAPalign | | -----LAFKIMADPYVGRLTFITSGSVYNTKGRKERVARLLRMHANHREEVAVVG |
7 | 5xnlO2 | 0.09 | 0.09 | 1.00 | 0.51 | CEthreader | | IKQLVASGKPDSFSGEFLVPSGKITLSVTQTKEVIGVFESIQPSDAPKDVKIQGV |
8 | 1tz0A | 0.13 | 0.09 | 0.69 | 0.19 | FFAS-3D | | TGEGIIEKFEGFIDLSVLVKKVRRGDEEVVVIRWESEE----------------- |
9 | 5lvuA | 0.02 | 0.02 | 0.87 | 0.83 | DEthreader | | P-LFTAAIAAMAVV--CASLDAHVARAALDAVALELIRDGAVVTLWANARL---- |
10 | 3r2uA | 0.06 | 0.05 | 0.93 | 0.83 | DEthreader | | KQASYLIGCQGEAMAAYVSGEVQH-DDI-YVGNI-KLKVLHTPG-HTPESISFLL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|