>PF17464 (203 residues) TSNEENPVGVQTLKPNNDAKRVFEMRKIPSSNVMRVEYTKQSKYRTCVCPSALHFAEECP SNDVLFSVGAHRNMLCVAKAFDQTKPRGMQRGNRRNNVAKVMTLNELMPKDDSNDRKKAK TSKDRKVEKSSRGRASSSRSRGRGGFSRNGRDRRETDSQDEYSEDNSYKSEEESTEDETA PLTKKDMLKMMSMFQSGAKSKRR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | TSNEENPVGVQTLKPNNDAKRVFEMRKIPSSNVMRVEYTKQSKYRTCVCPSALHFAEECPSNDVLFSVGAHRNMLCVAKAFDQTKPRGMQRGNRRNNVAKVMTLNELMPKDDSNDRKKAKTSKDRKVEKSSRGRASSSRSRGRGGFSRNGRDRRETDSQDEYSEDNSYKSEEESTEDETAPLTKKDMLKMMSMFQSGAKSKRR | |||||||||||||||||||
1 | 5ktaA | 0.05 | 0.04 | 0.73 | 0.55 | DisCoVER | -FNLKANTTYL-RLV------EEND--A-----E-F----------ITLRNNDDIKSQAIEEYYFIIFRSDDSPIGTVRLYDFH--ENPKS--FWGSWILNEHKTKYAAVESALL--VYEAGFSTLGFEQSHFEVMKGNDKVHSFHLKMGAQKISEDDENIYY-IFPKSKYKENKIQYARFL--------------------- | |||||||||||||
2 | 6lvbA2 | 0.08 | 0.06 | 0.81 | 0.67 | DEthreader | --RGYCDRPSFVLHGDSNGYKEEAISVPEGLKSDFYAVKIREDYIPFFVLPPATA-I-------ASTYLWILELPDLLIDWLNGFEYDYKV--VL-TGS---HPEYQ-NMYWIGRFRRATQKWGTGMS-SF-G-FDHSGYGGGGGYE--RLASSVEHSNGG--PFVRADITYFST---------SS-IS--WL-GSLSWND-- | |||||||||||||
3 | 3s8vA2 | 0.07 | 0.06 | 0.90 | 0.62 | CEthreader | IHSLRNVRAIDYDPLDK---QLYWIDS--RQNMIRKAQEDGSQGFTVVVSIQPYDLSIDIYSRYIYWTCEATNVINVT-------------RLDGRSVGVVLKGEQDRPRAIVVNPE---KGYMYFTNLQERSPKIERAALDGTEREVQLSDIHAVKELNLQEYRQHPCAQDNGGCSHICLVKGDGTTRCSCPMHLVLLQDEL | |||||||||||||
4 | 5xk2A | 0.08 | 0.07 | 0.92 | 0.55 | EigenThreader | PNNYVAKDGEKLNCSVGNCAGSTVKLSFITDTGFVAVDNTNKAIVVAFRGSAWKVVELKPEHYKIVVVGHSLGAAIASLAA-------ADLRTKNYDAILYAYA----APRVANKPLAEFITNQGNNY-RFTDDPVPKLPLLTMGYVHISPITAVTDNQVTVLDGYVNFKGNTGTSGGL--PDLLAFHSHVWY--FIHADACK | |||||||||||||
5 | 1qh4A | 0.18 | 0.10 | 0.58 | 0.33 | HHpred | WINEEDHLRVISMQKGGNMKEVFTRFQIETLKNYEFMWNPHLGYILT-----------CPSNGLRAGVHIKL------PNLGKHE-----------KFGEVLK----------------------RLRLQ---------KRGTGGVDTA-------AVGGVFDVSNA----------DRLGFSEVELVQMVVDG--------- | |||||||||||||
6 | 4m6fA | 0.10 | 0.05 | 0.49 | 0.75 | MRFsearch | ---------------------------------------------------LKRALKRLQKGDTLVVWKLMKHLISLVGELRER-------------GINFRSLTDMGALAEVERELIIERTMAGLAAARNKGRIG----------------------------------------GRPPKLTKAEQEQAGRLLAQGIPRKQV | |||||||||||||
7 | 6yxuC3 | 0.18 | 0.14 | 0.78 | 0.32 | FFAS-3D | ----RSP-GVDETIDKSTEKTLHSVKVIPGRGALEFDVDK--------------------RDTVGVRIDRKRRQTVLLKAL------GWTNEQIVERFGFSEIMMGTLEKDTTSGTDEALLDIYRKLRPGEPPTKESAQKEKRYDLARVGRYK-----------VNKKLGLNAGKPITSSTLTEEDVVEYLVRLHEGQTS--- | |||||||||||||
8 | 6zcaX1 | 0.14 | 0.13 | 0.94 | 0.60 | SPARKS-K | VDKNGKKGFTATVIPNRGAWLEYETDA---KDVVYVRIDRTRKLPVTVLLRALGFGQEILD---LIGDNTENSDKALLEIYERLRPDSRFFDPKRYKINKKLHIKNRLFNQRLAEKVLPYLENGIGFRKLYPNGGVVED-------EVTLQSIKIFAPTDQEGEQVINVIGNAYIEEEIKNITPADIISSISYFFNLLHGVGD | |||||||||||||
9 | 5hacA | 0.05 | 0.03 | 0.56 | 0.62 | CNFpred | ---------------------GLSVQAMDHVALVHMLLRD-NSILGLNLASLSKVLKIVDSDSLSLRHDDDSDVVTLTSENP--------------EKTRKCEYQLKLLEIEAESMGIPEMDYRSTV-----------------------------------------------------TLNSAEFAKIVRDMQVFGDTVTI | |||||||||||||
10 | 6dgvA | 0.10 | 0.08 | 0.78 | 0.83 | DEthreader | -----SWGGQQKWAFAS----V-QDGPT--DYG-L-------WDVVDVEADFLRAAEGLL-EPLHGVGFFFSMADILVVPKGKA-----------------S-QAPVNIDSVQRVYHYLSTQSVLLELKFCKLPVPTSFKDD-GTYKTELKGIDFKEDGNGHKL--EYNFNANLAPNLPTAYVKDQI-TL-D-FAYWAKNPAT | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |