Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | YNQEGYEFKITQAFNCVNDAIALTCSSVNHFLDIPKVINKYGVLATVALSKTEQLNLTDTKLESIVKNGFIIYEVVETIIKASNAITKDQQLFSKAIDDGINAVNKLQEAAIHLSSVGEPIVEYVTSFFGSHDQHEPLQHESLLFETYTPNSTSAVIEDYKLIGSNAQLIAVEI |
1 | 3qkcB2 | 0.06 | 0.03 | 0.51 | 0.58 | DisCoVER | | ------RILRAIIELTRVMGGIVEGQYHELGL-LNDLL-IEYVCKKKEG-TLHACGAACGAILEKLRRFGLYVGTV-QG----------------LLGKRS-G----------------------------------------------------------FEGRILKLAVEL- |
2 | 4kvzA | 0.10 | 0.08 | 0.83 | 0.83 | DEthreader | | ETVRESEANRIQAQTWFSSYDERTSSIRSISIETFFY-EP-SVL-DIGCTGIDAISFICSNAENIMQVSKKQDIIF--IH-LC--GLFKNPAIVNL-CIYI-VDLDRNSLEGTAEEYLKDQYRAS--LT-------MEEFKQ-LLHVVTKEQ-VSFHV-GWIIKNKR------- |
3 | 6ek4A | 0.11 | 0.11 | 1.00 | 0.62 | CEthreader | | VILERLESSLKEEQERKAEIQADIAQQEKNKAKLVVDRNKIIESQDVIRQYNKDYIPNISDLDKLDLANPKKELIKQAIKQGVEIAKKKYIELADARAKLDERINQINKDCDDLKIQLKGVEQRIAGIEDVHLQAAKLEQAWNIFAKQLQNTIDGKIDQQDLTKIIHKQLDFLD |
4 | 2ch7A | 0.05 | 0.05 | 0.97 | 0.97 | EigenThreader | | QAASFADQSTQLAKEAGDALKKVIEVTRMISVVESFQKGINAIAEQTNLLALNAAIEAARGRGFAVVADEIRKLAEESQQASENVRIRSIAEDKVSSEITARVEEGTKLADEADEKLNSIVGAVERINEMLQNIAAAIEEQTAAVDEINAKNAEEITNSVKEVNARLQ-----E |
5 | 2nn6A | 0.15 | 0.12 | 0.79 | 0.29 | HHpred | | -NHDG---------NIIDAASIAAIVALCHF-RRPDVIHHMPICVSFAFFQQTYLLVDPNEREERVMDGLLVIAMNKH--REICTIQLLKDQVLRCSKIAGVKVAEITELILKA----------LENDQKVRKEGGKFGFASIANQRITAF-KME-----KAPGGG-------- |
6 | 6ek4A | 0.13 | 0.10 | 0.72 | 0.35 | MRFsearch | | --EQERKAEIQADIAQQEKNKAKLVVDRNKIIESQDVIRQYNLADMFKISDLDKLDLANPKKELIKQAIKQGVEIAKKILGNISKGLKYIELADADLKIQLKGVEQRIAGIEDVHQIDKERTTLLLQA---------------------------------------------- |
7 | 3hhmB2 | 0.06 | 0.04 | 0.62 | 0.60 | FFAS-3D | | --------RLYEEYTRTSQEIQMKRTAIEAFNETIKIFEEQCQTQERYYIEKFKREGNEKEIQRIMHN-------YDKLKSRISEIIDSRRRLEEDLKKQAAEYREIDKRMNSI----KPDLIQLRK----------------------------------------------- |
8 | 5cwnA | 0.16 | 0.16 | 0.95 | 0.71 | SPARKS-K | | GDEEEFRKAAEKALELAKRLVEQAKKEPELVLEAAKVALRVAELAAKVFKKAAESALEVAKVEVASKEGDLVLEAAKVALRVAELAAKDKEVFKKAAESALEVAKRLVEVASKLVEEAAKVAEEVRKLAKKQGDEEVYEKARETAREVKEELKRVREEKGGWLEHH-------- |
9 | 3vuoA | 0.08 | 0.06 | 0.71 | 0.60 | CNFpred | | ------FKDLNNKLYEIYSKNRVYFRKIYFNFLDQWWTEYYSQYFELICMAKQSILAQESVVKQIIQNKFTDLSIPPDTLKLIKETTEKFIDLSNESQISMNRVDNFLNKCVFVEDIYPKFISYMEKYIN-------------------------------------------- |
10 | 5y05A | 0.05 | 0.04 | 0.77 | 1.00 | DEthreader | | RGNLAEQKRLDELTAQRGEVNDRLAALGIALEDLDAQVAKYESEI--S-------------------------VRQREDRLLQRRQASLEEQLLEVMERREELMAERSEELRRVDELQTELTEAQQARDAALVLDQARHQCATRRDALNAI-DDQLVELYE--------A---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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