Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | MFEKYIKYLKNLIFFQFIIYFFFISLTIWIIKNCQQEYSKSILDKQVLQENLTEEVLKLYSVINSKEEILESYKKYVDLSVPSSVSCLNYQELIPKIKSLRNKYDLVEPIDVFINSVFFKNNVQAIEGEGEAIHVNNYSINIKYACADFLTFLKIFSEIYSYMPPNTLISFVRVRNEEVLTPKNIYKLSVNHAPNLIYAKLILYIRELASK |
1 | 3jc8Oa | 0.06 | 0.03 | 0.47 | 1.70 | DisCoVER | | ---LTEL--PE--QRELLAQINDIGK----------------------------------------------------------------------------KSG-LELSSVTPGKESV-----GG-----GEFFARIPIKMTVSGN-YHEIALFLQEMANRRI--VNVNNIKFDSA-----------KLKNEKVVLQSEFQATTFRF--- |
2 | 3jc8Oa | 0.08 | 0.07 | 0.87 | 1.08 | EigenThreader | | DKYLDQFVKAPPAIKFGGLAFVVGALTAANFFMVIQPTEEEIGWAVAERRKLDLELADKSEI---AQNLNERRREMDVLEQKLSEALTELPEQELLAQINDIGKKSGLELSSVTPGKESVGGG---------EFFARIPIKMTVSGN-YHEIALFLQEMA-NMRRIVNVNNIKFDSAKLKN-----------EKVVLQSEFQATTFRFV-- |
3 | 3jc8Oa | 0.10 | 0.09 | 0.82 | 1.05 | MRFsearch | | ---KYLDQFIKFGGLAFVVGALTAANFFMVIQPTEEEIGWAVAERRKLDLELADKSEIAQNLNERRREMDVLEQKLSEALT-----QRDIEELLAQINDIGKKSG-LELSSVTPGKES----------VGGGEFFARIPIKMTVSGN-YHEIALFLQEMANM-RRIVNVNNIKFDSAK---------------KVVLQSEFQATTFRF--- |
4 | 6elhA | 0.04 | 0.03 | 0.81 | 0.83 | DEthreader | | TPSQKALGKYVFLTVALFVVQVLLGGLTAHYTVEGQGFYGIDELGFEMSDWFP-ALTTWQVGGSYLWLLMVGLLLWLFLMLRCTALAFVSMVGVG-FYW-VVHV----------------------EWAKR--------------NTAVHAHAALFGYGFLALGFVLMGFLLGGVGM-AISLLPVGVIQASALLDLRRAIFGAVAATIVRD |
5 | 2rjzA | 0.10 | 0.07 | 0.64 | 0.93 | CEthreader | | ----------------------------------------------SLKQQFSTKAFQAANLEAYKAQMKEMEESFGALLR-QLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVAQQF-------------YIELPIQISVVG-GYHDLATFVSGVSSLPR----IVTLHDFEIKP---------VAPGSTSKLRMSILAKTYRYN-- |
6 | 3jc8Na | 0.08 | 0.06 | 0.79 | 0.97 | EigenThreader | | LPVRAVKKREMGRQV----------LVLFAVVLIGAGVANYLWYDDRQSELEAHQAGVASTKARIAELEKIIGEVKNINTRKAEVEKKLAVLDALRKGRSG----PVRMVWVKTFSENNN----------------AVSIDGSAVSHDE--VAEFMRGEEFPESPFFKNILQTAKQVG-----------GAQVGVPILVEFKITMTSNY-- |
7 | 3jc8Oa | 0.12 | 0.10 | 0.84 | 0.46 | HHpred | | -MDKYLDQPAIFGGLAFVVGALTAANFFMVIQPTEEEIGWAVAERRKLDLELADKSEIAQNLNERRREMDVLEQKLSEALTPEQ---RDIEELLAQINDIGKKSGLE--LS-SVT--P--GKE-SV-GGGE--FFARIPIKMTVS-GNYHEIALFLQEMAN-MRRIVNVNNIKFDSAKLK-----------NEKVVLQSEFQATTF----- |
8 | 2rjzA | 0.09 | 0.05 | 0.61 | 0.58 | MRFsearch | | ----------------------------------------------SLKQQFSTKAFQAANLEAYKAQMKEMEESFGALLR------TEVPGLLEDITRTGLGS----GLEFEEIKLLPE---------VAQQFYIELPIQISVVG-GYHDLATFVSGVSSL-PRIVTLHDFEIKPVAP------------GSTSKLRMSILAKTYRY--- |
9 | 3jc8Oa | 0.12 | 0.10 | 0.85 | 0.85 | FFAS-3D | | -MDKYLDQFIKFGGLAFVVGALTAANFFMVIQPTEEEIGWAVAERRKLDLELADKSEIAQNLNERRREMDVLEQKLSEALTELPEQ-RDIEELLAQINDIGKKSGL------ELSSVTPGKES---VGGGEFFARIPIKMTVSGNYHEIALFLQEMAN----MRRIVNVNNIKFDSAKL-----------KNEKVVLQSEFQATT------ |
10 | 3jc8Oa | 0.11 | 0.10 | 0.87 | 0.86 | SPARKS-K | | -MDKYLDQFVKAP-PAIKFGGLAFVVGALTAANFFMVIQPTEEEIGWAVAERRKLDLELADKSEIAQNLNERRREMDVLEQKLSPEQRDIEELLAQINDIGKKSGL------ELSSVTPG---KESVGGGEF--FARIPIKMTVSGN-YHEIALFLQEMAN-MRRIVNVNNIKFDSAK-----------LKNEKVVLQSEFQATTFRFV-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|