Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | VAPIKGQDHFLNLVFPERVAAAYMSPLAQKYPKAALSIASLAGFLLGILKLITFPVLCAAGLFVFPIRGLISCLFHKSFQGCSGYVLATFLSLFSLALTIVGIVSCITWAPGFIFPMISVSIAFATVETCFQIYTHLFPALEHKPSSSLKIEI |
1 | 6w7iA | 0.06 | 0.05 | 0.81 | 1.00 | DEthreader | | -----ERQKVYE-E-VQEFLLGDAEKRFEM-D--HR-KGYLKSMMDTTCLGG-K-YNRGLCVVDVAEAMAKDT-Q-MDAAAMERVLHDACVCGWMIEMLQAHFLVEIWYAQVAINDGL-ILLAWATQ-MALHYFADR------------SGTL |
2 | 2j91B | 0.08 | 0.07 | 0.88 | 1.00 | DEthreader | | ------R--FRTWRQLWLLAVGAAG-I-------I-HLG-ATSCYVGDNTDLIILRNALDLLLPKLARVISRLADFARGKRCCLWIQDLCMDLQNLKRVRDDLRFRRAFITGTYTRKVDIEVLSVLASLGASVHKICTDIRLLEMVYPKVIER |
3 | 4jzbA | 0.06 | 0.05 | 0.81 | 1.00 | DEthreader | | -----ERQKVYE-E-VQEFLLGDAEKRFE-MD--HR-KGYLKSMMDTTCLGG-K-YNRGLCVVDVAEAMAKDT-Q-MDAAAMERVLHDACVCGWMIEMLQAHFLVEIYTAQVAINDGL-ILLAWATQ-MALHYFADR------------SGTL |
4 | 3rauA | 0.08 | 0.08 | 1.00 | 0.56 | CEthreader | | MGSGQEAAVPVTWTEIFSGKSVAHEDIKYEQACILYNLGALHSMLGAMEEGMKVSCTHFQCAAGAFAYLREHFPQAYSVDMSRQILTLNVNLMLGQAQECLLEKSMLDNRKSFLVARISAQVVDYYKEACRALENPDTASLLGRIQKDWKKLV |
5 | 3rauA | 0.05 | 0.05 | 1.00 | 0.67 | EigenThreader | | NLGALHSMLGAMDKVSCTHFQCAAGAFAYLREHFNLMLGQAQECLLEKSMLDFLVARISAQVVDYYKEACRALENPDTASLLGKDWKKLVQMKIYYFAAVAHLHMGKQAKFGERVAYFQSALDKLNEAIKLAKDNDFIVNPTDPAVTGPDIFA |
6 | 5llmA | 0.15 | 0.12 | 0.78 | 0.34 | HHpred | | ----DVKSFLRRNALLLLTVLAVILGFLPLSPREVKYFAFPGELLMRMLKMLILPLIVSSLI-----TGL-ASLDAKASGRLGMRAVVYYMSTTIIAVVLGIILVLII-HPE-------------VLDCFLDLARNIFPSNLVS--------- |
7 | 6r72A | 0.13 | 0.12 | 0.88 | 0.37 | MRFsearch | | -------VSYFDTNASGETVSRVTNDTMVVKELITTHISGFITGIISVIGSLTILFLTLLVLVVVPLAALILVPIGRKREAKVQSLVGPLISLVLMAALVAALVAFILYLFQIIMPMGQITTFFTQLQKSIGATERMIEILA----------- |
8 | 4hkrA | 0.19 | 0.16 | 0.81 | 0.87 | FFAS-3D | | -----------------YLSWRKLQLSRAKLKASSKTSALLSGFAMVAMVLIAFAICTTLLVAVHMLALMISTCILPNIETAWAFSTLLGLILFLLEIAILCWVKFYDLSRRAAWSATVVLIPVMIIFMAFHFYRSL---VSHK--------- |
9 | 7abhu | 0.08 | 0.08 | 0.97 | 0.71 | SPARKS-K | | YKLDDLVR-----PYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMREYVRNTTARAFAVVASALGIPSLLPFLKAVCQARHTGIKIVQQIAILMGCAILHLRSLVEIIEHGKVRTISALAIAALAEAATPYGIESFDSVL |
10 | 4he8G | 0.09 | 0.07 | 0.84 | 0.79 | CNFpred | | ---------IKTPLFPLHAWLPPFHQENHPSGLADALGTLYKVGVFAFFRFAIPLAPEGFAQALLLFLAALSALYGKDFKTLLAYAGLSHMGVAALGVFSGTPEGAMGGLYLLAASGVYTGGLFLLAGRLYERTGTL---------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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