Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | PEFRYFKCALSVEPIKSLDEQWRKDRELRDKKLDAIFDTIPFYECWRGSERNIFGIVCSLDSDEFAKIKEDKTYKFEIVENEKVVITGNGRTKAGKAFNDKIQSVRDILNQYPSFNDFMLRKLKLNCWVLGARTSYISVCGVASDYFIVSIPVKSDGFGGDGFPAIPECLTEIKQSEFLMLQGK |
1 | 3t66A | 0.04 | 0.03 | 0.82 | 0.72 | DisCoVER | | KHIHFLFVSTNSLDP--H--VDMTYIPVRA--GI--TETLLAESWDSTDGQHWTIKLREMDA--EAVKASLAIDEIEA---DGYTLHITTKE---------P--FPEFISELVNP--NV--SIIDVNHPVGTGPFALESF-T--PGSKLELVRYDGASKL-DSVTFS-FNEVYVKNWVYYMIT- |
2 | 6iabA | 0.05 | 0.03 | 0.68 | 0.67 | DEthreader | | LEPKFMGFGGRNAVN--Q----------------------------S--------INIDKETNHMYSTQFGHGTTIGLREMKIWPLLRGTIQVRKEMLWYSGQKI--YDY-PFKLINFPRNFKEPEGCIYTNKRKSLLLAMTNKRFHNLYGFFQL-GE---YEHFLRAGS-------------- |
3 | 2xt6A1 | 0.07 | 0.07 | 0.97 | 0.75 | CEthreader | | TATSVRAIPAK-LMIDNRVVINNHLKRTRGGKISFTHLLGYAIVQAVKKFPNMNRHFAVVDGKPTAITPAHTNLGLAI----VVAAIKRCETMRFGQFIAAYEDIVRRARDGKLTAEDFSGVTISLTNPMQGQGAIIGAGAMEYKLITLTSTYDHRIIQGAESGDFLRTIHQLLDDDFFDEIFR |
4 | 4lglA | 0.07 | 0.07 | 0.98 | 0.65 | EigenThreader | | LGYGGPHATAQVLLAVMASMYIALRIHQLTVLLAIGLKRLNYSLNNDYFFDTLRVGVGEQSAPAILKAAEGRGINLRPLVPGEVGISLDETVTVQDLLDLWQVFAGSKAEKYGDRICDIVHRFGGEVYMDGAADVCHLNLHHGGGGPGMGGVKRTSLDQSIGMISAAP---YGSASILVISWMY |
5 | 2xt6A1 | 0.13 | 0.08 | 0.62 | 0.31 | HHpred | | ---------IKRCETMRFGQFIAAYE----DIVRRARDGKLTAEDFSGVTISLTNP----MQGQ-GAIIGAGAMELGIGKLITLTSTYDHRIIQGAESGDFLRTIHQLLLD-DDFFDEIFRELGIPYEPVRWR--------------------------------------------------- |
6 | 5g4iA | 0.11 | 0.06 | 0.52 | 0.60 | MRFsearch | | ---------------EDLMAKADQLGKYIRKRLENIAQRSGNVGSVR-GRGLFFGIDIIESTKILIEDMRERGVLISRVHDNVLKMRPPL-VFGREHADILLGQLELSLASLP----------------------------------------------------------------------- |
7 | 4gupA1 | 0.11 | 0.07 | 0.63 | 0.50 | FFAS-3D | | PRAPWMAENLAPDHWERYTQLLRGWQQMFKVELKRLQRHYNH----SGSHTYQRMIGCELLEDG----STTGFLQYAYDGQDFLIFNKDTLSNVAHTIKQAWEANQHELLYQKNWIAWLKRFLE------------------------------------------------------------ |
8 | 6ukeX2 | 0.10 | 0.09 | 0.83 | 0.54 | SPARKS-K | | -------------------MNWKEFEVFCVTYLNKTYNKF---AKKGESDSTTSDILFTGNNPFYIEAKMPHSVLIPNRAEYKFDYSPKNKSEINPYTQKIMQFMSENFSEYANFVNWIKEYYKVKFFITSNGDFIIFPYRIKKSNVIFSISLKNNIS---------LFILNEDRKAFEAAISL |
9 | 2vpqA | 0.07 | 0.05 | 0.77 | 0.64 | CNFpred | | ---------------KELETGFRMTEQEAQTAFGN----GGLYMEKFIENFRHIEIQIVGDSYGNVIHLGERDCTIQRRMQKLVEEAPSP--ILDDETRREMGNAA----------VRAAKAVNYENAGTI----EFIYDLNDNKFYFMEMNTR--------IQVEHPVTEMVTGIDLVKLQLQ |
10 | 6gmmA | 0.04 | 0.03 | 0.74 | 0.83 | DEthreader | | RLLYLNIRSADPNAINNARGNLNASAKNLIDSPAYQAVLLALN-------------LLEASTIITTLNCAIFNEISAQD--IKNVDFEIAEVGCVGETVTNLKDSIAHFGDQAEIHNARN--L-----------------YTLANFQYLHYITISAQSLQN-VVSKKNIDNY------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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