Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MRTGFYIVGKLLGQKSTSFTHRETGEVKYKHTIGIQLQDPDGFGGYNTFTQDLRIDERSVNQGLSSSIERLKGKNVMVLVFPREWAMEGGRKGIIYHFDENSVIEEIK |
1 | 3stbC | 0.05 | 0.05 | 0.91 | 1.17 | DEthreader | | RCNHCVMLGVVQNIQEGFVFE------DKVLQFTLITDFEGPSPDPDKDFHTVRVFSDYSS-RVKEQL--RDGEWFLVTGRLRMVPQYDYYHYPVIQVHPGGSVLKV- |
2 | 4dniA | 0.10 | 0.09 | 0.92 | 1.17 | DEthreader | | LVNSVTLVGVVHDIQSGFV-Y-----EDAVTQFTLTTTSIDTHVVVEKDHHTIRCFGEFSA-EVKQKV--KEGNVVCVNGRLRLSPQLEHFYFPYIQVQPPQVAVIHG |
3 | 2vw9A | 0.17 | 0.15 | 0.88 | 1.03 | MAPalign | | --NKVIMVGRLTRVELKYL-----PSGSAAATIGLATSRRFGTLGEEVCFIDARLFGRTAEI-ANQYL--SKGSSVLIEGRLTYESWGKKNSRHTITAD--S-LQFMD |
4 | 3ja841 | 0.13 | 0.12 | 0.90 | 1.17 | DEthreader | | QLKLINLKGLVLRSTPVIPDMALIHCFADKQVIKLQETPVPD-G-QTPHSISLCVYDELV----DS-C--RAGDRIEVTGTFRSIPILKSLYKTYVDVV--HVKVSDL |
5 | 3stbC | 0.07 | 0.06 | 0.90 | 1.17 | DEthreader | | CVNHCVMLGVVQNIQEGFVF------EDKVLQFTLITDFEGPSPDPDKDFHTVRVFDSYSS-RVKEQL--RDGEWFLVTGRLRMVPQYDYYHYPVIQVPGGSVLK-V- |
6 | 4dniA2 | 0.12 | 0.11 | 0.94 | 0.23 | HHpred | | CVNHVTLVGVV-HDIQSGFV--Y-EDAVTQFTLTTTSIDTTHPTQVEKDHHTIRCFGELFSAEVKQK--VKEGNVVCVNGRLRPQLEPSCNKHFYFPYQPHGQVAVIH |
7 | 3pgzA | 0.09 | 0.08 | 0.92 | 0.75 | DisCoVER | | --NKVILIGNLGADPEIRR----LNSGDQVANLRIATSESWRDRKERTEWHNIVIFNENLVKVVEQYL--KKGSKIYIEGQLQTRKWQNGRYTTEIVLQKRGELQML- |
8 | 5xgtA | 0.14 | 0.12 | 0.83 | 0.65 | MRFsearch | | --NRVVLVGRLTK--DPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQ-----ADNVNNYKGSLAGVDGQSRNYENQEGRRVFVTEVV--------- |
9 | 3pgzA | 0.12 | 0.11 | 0.94 | 0.88 | SPARKS-K | | SLNKVILIGNLG--ADPEIRRLNSGD--QVANLRIATSESWRDRKERTEWHNIVIF---NENLVKVVEQYLKGSKIYIEGQLQTWQDQNGRYTTEIVLQKYRGLQMLD |
10 | 3vdyA | 0.11 | 0.09 | 0.88 | 1.00 | MAPalign | | --NQVMLVGRLTKPDLRYT-----SAGAAVAHVTLAVNRKNASGEIEADYVNCTLWRKTAEN-TALYC--QKGSLVGVSGRIQTRSYEVNVYVTEVLAD--T-VRFMD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|