>PF17422 (353 residues) ATKNKKETVNTETKNLANLVIQGIGDENFDFGVLQKMQQAFSTASKQKQREAFISLLDKK LNKEQLHKLNQAIMENANELMPDNDPNFVCRTPNNKVFQEILLLEAKRSGMKAKFNDKGE LQSLDVKDITQEILDHYSMLQEKFYPKRDSKDLIDSRIAQSINFLLYAPLFRESDIYTKL GLKSAEIEREIQDPNGKYAKPLVDAKIGTNINFNTKENLENKAHEGKETKISSIIEKAIT KLKKDKKVNIEDTRQGEIKRHLSKSLEGASDYILTFKKNDLVDVIYQGLDKRQTWWSKIV NYIGIKSYSISKENLEKIGTIINSEMKNSHTPLKIEAQEQLKQIAKELNRLNN |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | ATKNKKETVNTETKNLANLVIQGIGDENFDFGVLQKMQQAFSTASKQKQREAFISLLDKKLNKEQLHKLNQAIMENANELMPDNDPNFVCRTPNNKVFQEILLLEAKRSGMKAKFNDKGELQSLDVKDITQEILDHYSMLQEKFYPKRDSKDLIDSRIAQSINFLLYAPLFRESDIYTKLGLKSAEIEREIQDPNGKYAKPLVDAKIGTNINFNTKENLENKAHEGKETKISSIIEKAITKLKKDKKVNIEDTRQGEIKRHLSKSLEGASDYILTFKKNDLVDVIYQGLDKRQTWWSKIVNYIGIKSYSISKENLEKIGTIINSEMKNSHTPLKIEAQEQLKQIAKELNRLNN | |||||||||||||||||||
1 | 2w6dA2 | 0.07 | 0.04 | 0.57 | 0.61 | DisCoVER | IIRDTQARTISESFRYVLNLGNTF---RY--QPE-LNLFDFLSS---AFNAALQKAF--QY----ITDKSAAWTLTAEKDINAAFKELSRASYGASYNQITDQITEKLTGKDVESPGWAKWA--------------MG--LLSLAGFAL-FDWKNILLNYFTVIGIGGIIT----AVTGIL-PIGFALLGLGVGFLQADQARLTA-LPQVAHEQSQVVY--NAVKECF----------------------------------------DSYEREV--------------------------SKRINDD--------------------------------------------- | |||||||||||||
2 | 6u8yX | 0.05 | 0.04 | 0.73 | 0.67 | DEthreader | ---------PIILLSPSAIPLYFLIKL-Y--PALEGEPI--RYSLNELTLA-LSHISWIFAM---IAAVVGLSAVLGLVSTAKDSN--E-WLFALMSLAGALGVFVVFFLSWEIMFA--MMFVIAAYAMFVAFGVKAHWAPDAYSET-N-Q--SYTAMFSGVLSKTGVYGFF--LLYLLMYG--AAPFGYIAFLGLTIIGYIGGAAATYHIS--L---L---MAFVAILSLAGGFSKWLIFVLPLGAMVFF--GSA-IGFVYLIRFTYAVW---------------------------------------RRN-FFLPLKE--AMA----FWLK--MSFDRLYHDIW------ | |||||||||||||
3 | 6w2rA | 0.14 | 0.08 | 0.59 | 0.80 | CEthreader | ---GTTEDERRELEKVARKAIEAAREGN-TDEVREQLQRALEIARVKLALDVALRVAQEAAKRGN-KDAIDEAAEVVVRIAEESNNSDALEQA-LRVLEEIAKAVLKSEKTE------------DAKKAVKLVQEAYKAAQRAIEAKRTGTPDVIKLAIKLAKLAARAALE---VIKRPKSEEVNEALKKI-------VKAIQEAVESLREAEES-------GDPEKREKARERVREAVERAEEV------------------------------------------------------------------------------------------------------------ | |||||||||||||
4 | 5h7cA | 0.11 | 0.10 | 0.87 | 0.97 | EigenThreader | LAEAKSLNVNQAVKQLAEKAKEA-----TDKEEVIEIVKELAELAKQEIVKQLAEVAKEATDKELVIYIVKILAELAKQ------------STDSELVNEIVKQLAEVAKEA--------TDKELVIYIVKILAELAKQQLEEVAKEATDKELVEHIEKILEELEQQSAFYEILSLSLNVNQAVKQLAEKAKEATDKEEVIEIVKELAELAKQS-----------TDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQS---TDSELVNEIVKQLAEVAKEAKELVIYIVKILAELAKQSTDSELVNEIVKQLEEVAKEA------TDKELVEHIEKILEELKKQS- | |||||||||||||
5 | 1vt4I | 0.19 | 0.17 | 0.90 | 0.54 | HHpred | ---SKQEEMV-------QKFVEEVLRINYKFLMPIKTEQRQPTRMYIEQRDRLYNNQVFAYNVSRLLKLRQALL----ELRPAK--NVLIVLGSGKTWVALDV--CLSYKVQCKMDFKIFWLNLKNCNSPETVL---EMLQKLLYQIDTSRSDIKLRIHS-I----QAELRRKSKPYENCLLVLLQNAKAWNATRFKQVTDFLSAATTTHISLDH------HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLWDNWKHVNCDKLTTIIESSLNVLRKMFDRLSVFPPSAHIPTILLSLIWVMVVVNKLHKYSLVEIYLELKVKLRSIVDHYN---- | |||||||||||||
6 | 3igoA | 0.10 | 0.07 | 0.73 | 0.40 | MRFsearch | -----------CDVWSAGVILYILLSGKNEYDILKRVETGFDLPQWRTISDDAKDLIRKMLTFHPSLRI-----------------------TATQCLEHPWIQKYS-----------SETPTISDLPSLESAMTNIRQ------------FQAEKKLAQAALLYMASKLT----TLDETKQLTEIFRKLDTNNDGML----------------------------DRDELVRGYHEFMRLKGVDSNSLIQGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLESIIEQVDNN--KDGEVDFNEFVEMLQNFVRN--- | |||||||||||||
7 | 6vacA | 0.15 | 0.14 | 0.93 | 0.83 | FFAS-3D | -NLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKHFHPLFEYFDYESRKSMSCYVLSNVLDYNTEQDQVDSIMNLVSTLIQFADERFIHLLRSDDPDQQYLILNTARKHF-------GAGGNQRIRFTLPPLVFAAYQLAFRYKENSQMDDKWEKKCQKIFSFAHQTIKAELAELPLRLFLQGALAAGEIGFEN--------HETVAYEFMSQAFSLYEDEISDSKAQ--LAAITLIIGTFERMKCFSEEEPLRTQCALAASKLLKKPDQGRAVSTCAHLMECLKKALSLQVQLFIEILNRY-IYFYEKTIQVLNQLIQKIREDLPNLESSEETEINKHFHNTLEHLR---- | |||||||||||||
8 | 5h7cA | 0.13 | 0.12 | 0.91 | 0.68 | SPARKS-K | DPSQSANLLAEAKSLNVNQAVKQLAEKEEVIEIVKELAELAKQSTDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQ--------STDSELVNEIVKQLAEVAKEA------------TDKELVIYIVKILAELAKQS-----TDSELVNEIVKQLEEVAKKELVEHIEKILEELEQQSAFYEILSLPNLNFIQSLKDANLLAEANQAVKQLAEKAKEATDKEEVIEIVKELAELAKQST----DSELVNEIVKQLAEVAKEATDKELVIYVKILAELAKQSVNEIVKQLAEVAKEATDKELVIDSELVNEIVKQLEEVAKEAT---DKELVEHIEKILEELKKQS- | |||||||||||||
9 | 2ie3A | 0.13 | 0.11 | 0.82 | 0.85 | CNFpred | -----------TSRTSACGLFSVCY-PRVSSAVKAELRQYFRNLC-PMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVR-----LLAVEACVNIAQL----------------LPQEDLEALVMPTLRQAAEDK------SWRVRYMVADKFTELQKAV---GPEITKTDLV--PAFQNLMKDCEAEVRAAASHKEFCENLSADCRENVIMS-------QILPCIKELVSDA------------NQHVKSALASVIMGLSPILGKDTIEHLLPLFLAQLK-CPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDKWRVRLAIIEYMPLLAGQLGVEFF | |||||||||||||
10 | 6h02A | 0.07 | 0.05 | 0.75 | 0.83 | DEthreader | IEEAFPGMFMTKLISCLGAFRQFWGGLSHCQWIVKFIHGQHSPKRISFLYDCLAMAVEGLLP---PRLVCESLINS-DTLEW--E-RTQLWALTFKLVRKIIGGVDYKGVR-L------EVAYLERNCLPAYFAVTEIRKLYPEGKLP---HWLLGNLVS-------------------------------------------T-RFPLKGYDLFPQALLRYVMAENITAWMN--R--SVISSPSLTS-YS---C--TL--AHAVWHHSSI--L---I---L---LIVKTEFLLYVYHLVGPF-LQRFQCMIEIGVAFYDMLLNVDQCSLMDPICDFLYHMKYFTGDSV---- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |