Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MSNIIKFPKEIEQPAAPAPVEPAAAPAAPNKAPGAGLLAGLVKFVWVATVLVWPVLKWVLSIITFFQFVRMLYHWNTPGVYAGWSFLAYFAVLTAITYFVSIYKPKGL |
1 | 3id5A | 0.06 | 0.05 | 0.80 | 1.00 | DEthreader | | -------------------DYITNITELLYRLRAAQK-RDLLAIQAVRAMDDIDKTINLFSERLREWYSIHFGADISE-D-DLSAMRMIANTILDLYNIRRNLNLAGA |
2 | 3pikA | 0.09 | 0.07 | 0.81 | 1.17 | DEthreader | | ---------------ANDIIRQSVNEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGA-----VSYLEVLDAERSLFATRQTLLDLNRQEI |
3 | 4ry2A1 | 0.10 | 0.07 | 0.78 | 1.00 | DEthreader | | ------------------------TNAYGASRKGEIISRFMDASKIRQAISGATLTIMIDTIMAVIGGILLYIQNMLLFNALLAYFLTPVKNLIDLQPLIQTAVSNGL |
4 | 1yc9A | 0.11 | 0.09 | 0.85 | 1.17 | DEthreader | | ----------------GGRGQSAERQEAVAQYNGTLVQALHEIADVVTSSQALQARINKTEQAVQQAEQALHIATYQYVLVAEESLLNNQRALVNLQSRAFSLDLIAL |
5 | 3v5sA1 | 0.15 | 0.09 | 0.60 | 0.74 | DisCoVER | | -----------------------------------------MVILGVGYFLLGLILLYYGSDWFVLGSERIARHFNVPVVFSLVLLIIGLIGVLVGAELFV-DGAKK- |
6 | 1yc9A | 0.11 | 0.08 | 0.78 | 1.00 | DEthreader | | ------------------------KQLAEAADAGTLVQALHEIADVVTSSQALQARINKTEQAVQQAEQALHIATYYLVLVAEESLLNNQRALVNLQSRAFSLDLIAL |
7 | 3jacA | 0.08 | 0.06 | 0.66 | 0.79 | CEthreader | | ---------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
8 | 2d4cB | 0.06 | 0.06 | 1.00 | 0.67 | EigenThreader | | QFHKATQKVSEKVGGAEGTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQASRAKLSMEALLAEAMLKFGRELGDDFGPALGEVGEAMRELSEVKDSLDIEVKQNFI |
9 | 6xlpA1 | 0.19 | 0.12 | 0.64 | 0.26 | HHpred | | --------------------------RQRYREKVSQMVSW---GHWFA------LFNILLSL---VIGSRYLFIADWPTTLAGRIYSGHFSFLVFATYLLILIVGSQ- |
10 | 5fgnA | 0.09 | 0.06 | 0.65 | 0.33 | MRFsearch | | ----------------------------------GSSALIAFLSLYSSLVLNYAFFALYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFN---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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