Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MVYGYGKSNMPHPNRKRKGTDTQYDYWEELLVMVSGLYALFCVFLVLFIFFDSFKQESNKLELSGKEEKKKLNGENRLSRDIQNLLYIK |
1 | 4e29B | 0.10 | 0.09 | 0.94 | 1.17 | DEthreader | | IITQ-IGSSSTIEVSYVAAQKAQYIQQVDDKVNQELERDLKDNIALGRKNLQDSLRTQEVVAQEQKDLRIRQIEEARYADKTSD--K-- |
2 | 6irdB | 0.08 | 0.08 | 1.00 | 1.50 | DEthreader | | MKKCLKKETEKQTLTTDHKSKVKEIVAQHTKEWSEMINTHSAEEQEIRDLHLSQQCELLRKLLINAHEQQTQQLKLSHDRESKEMRAHQ |
3 | 5xtce | 0.08 | 0.01 | 0.15 | 0.93 | DisCoVER | | LYNPDSHGYDKDP---------------------------------------------------------------------------- |
4 | 4ntjA | 0.04 | 0.03 | 0.94 | 1.17 | DEthreader | | -CQTSIFFFSL--MIL-KSEFLVWHEIVNYICQVIFWINFLIVIVCYTLITKELYRSYVRTADLEDNWETLNDNLKIEK-ADNAAQVKN |
5 | 6dhtA | 0.07 | 0.07 | 1.00 | 0.43 | CEthreader | | KVIEGAEQTPFHAPYGNDAKDFFWGCLAEKCMNQGVSLMYAYLQTGKDVYLTNAYRNMDYILGRNATGFCYVTGLGTKSPKHPHHRLSA |
6 | 6yvuA | 0.08 | 0.08 | 1.00 | 0.52 | EigenThreader | | IARNEEILRDIGECENEIKTKQMSLKKCQEEVSTIEKDMKEYELEEQESESERKYDLFQNLELETEQLSSELDSNKTLLHNHLKSIESL |
7 | 3rfrC | 0.21 | 0.13 | 0.63 | 0.27 | HHpred | | --------------GWRAGLDSFQTYWMSILWTEIPLELVSGLGLAGYLWK---TRDRNVDAVAPREEMRRLV---------------- |
8 | 4chvA1 | 0.15 | 0.12 | 0.80 | 0.38 | MRFsearch | | --TGYGDTI-------------PQSFAGRVLAGAVMMSGIGIFGLWAGILATGFYQEVRRGDFVRAAVPLFQKLGPAVLVEIVRAL--- |
9 | 6rd48 | 0.19 | 0.15 | 0.76 | 0.44 | FFAS-3D | | ---GAIPANVPHP----FQTSFYTYATKKLIPRHWYLLGGFTFTITLYGILDGLRDSGKK----KAYDEAIHAGKTPYT---------- |
10 | 2vwaA | 0.18 | 0.17 | 0.93 | 0.77 | SPARKS-K | | -----NKINLNKPIIENKNVDVSIKRYNNFVDIARLSIQKHFEHLSHVKFVQGLQENRN-ISLSKYQENKAVDLKYHLQKVYANYLSQE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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