>PF17378 (182 residues) MSTESEEENTIVCTQDFLRQYFVSENVSNQFGLNNNTVRKINEKEFDKAAKCIMTEIGYP GPELKREASTHLVKGCYKKPTTLSFPFIMDDALNLLKGVENNNDISLLYSDTLYGDDTLT QRNGQVKDVIEDELSFTLLQSEANDIRPVTSSSATQILQSDYSVVMHEAQVSNGSIFQFS SP |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MSTESEEENTIVCTQDFLRQYFVSENVSNQFGLNNNTVRKINEKEFDKAAKCIMTEIGYPGPELKREASTHLVKGCYKKPTTLSFPFIMDDALNLLKGVENNNDISLLYSDTLYGDDTLTQRNGQVKDVIEDELSFTLLQSEANDIRPVTSSSATQILQSDYSVVMHEAQVSNGSIFQFSSP | |||||||||||||||||||
1 | 6ku5A | 0.05 | 0.04 | 0.73 | 0.59 | DisCoVER | TSN------DGKLI---W--KIEDFRSVPFHTG-PCGYKMA-------SK--VYLNGDGEGRGTHLSLYVVLMVGDFDLWPFRQTVALS--VLDQSGAG-----NHQSLSFKPDLTSKSF-Q--RPTAGNV-AVGFSCFIPLLE-NATYVKEDT--MF---V--KV---------KVDMVG- | |||||||||||||
2 | 6hwhV | 0.03 | 0.03 | 0.80 | 0.83 | DEthreader | LYLVTTTDHKGMY----FFFGVMLLFTPIVGF-----FWFGTILGAVNMITV--R---MIFRMPIFTWNLVTSVIVLVAFPEIIPFGIVTEIFPVFSPVFG------AT--IGSIVWH--SMTFMIAVPTG-IK-F--NW-GTMWSVLVTFYFGIVFATYAGVYF-WFPKMTG-------ML | |||||||||||||
3 | 5gmkq | 0.08 | 0.08 | 1.00 | 0.52 | CEthreader | FVARGKLKAPKWPILKNLELLQKTFPYKEKWVCMCRCEDGALHFTQLKTITTITTPNPRTGGEHPARLLLLYPSKTNKVLREMYGHADNRGTIGFYIVHSAKSDVEYSSGVLHKDSLLLALYSDGILDVYNLSSPDQASSRFPAKIKEVKFADNGYWMVVECQTVVCFDLRKDVGTLAYPTY | |||||||||||||
4 | 6mafA | 0.04 | 0.03 | 0.94 | 0.60 | EigenThreader | NAFDEETEELVRQAKSGYHAFIEGINYD----EVTKLDLNSSVAALEDYISIAKEIEKRSDYAGSIIPEFLYRIVHVATVKAGLKPIFSII--EISGAAHREGLQIRRKFALGFHEV--DVKIASESHRV---ISLAVACEVKTNIDKNKLNGLDFSAERMKRTYTLDFSPDENHSSGLIDE | |||||||||||||
5 | 4a17C | 0.19 | 0.14 | 0.71 | 0.38 | HHpred | -----------------------------MFAPLRRVHRRVNVNQKRHAVAAALAASALVPLVFAR---------GHRISNVQELPYVFDDSVESYKDVLLRRGPLVVYGNE---KSTLTRRNIPGVFIIWTESAFKKLNEIFGTYSPLANADIARIINSNEVQVVKVAG------------ | |||||||||||||
6 | 6bq1A | 0.17 | 0.07 | 0.42 | 0.50 | MRFsearch | --------QCVIAVADKVFDAFLNMMADKA-------KTKENEEELERHAQFLLVNFNHIHKRIRRVADKYLSGL------VDKFPHLLWSGTVLKTM------------------------------------------------------------------------------------ | |||||||||||||
7 | 6em5n | 0.16 | 0.13 | 0.82 | 0.32 | FFAS-3D | MRIKKKNTRNFITRSQAVRKL------------------QVSLADFRRL--CIFKGI-YPREPRNKKKAN---KGSTAPTTFYYAKYLMHEPVKLTRALGRGEVKRLEENRDSYTLDHIIKERPDAIRDIDDALNMLFLFSNLPSTNQVSSKNDAQKICNQWLAYVAKERLVR--------- | |||||||||||||
8 | 5i4aA2 | 0.14 | 0.12 | 0.85 | 0.55 | SPARKS-K | INVIYKKNGESRYAKDVFKYSFYKQPLKAIFFFSSKKQFFEVQKSLKELFH--------NKHSVFYRAAAELFSEFLRDSKTKSSAFLYNPEFTVTEFINQIEDNAIVLLDKYIGNI------DPLVRNFPDNLLQPILKEKLEDIKP-------FIIKSYVYKMGNFIPECKPFI------ | |||||||||||||
9 | 3ch0A | 0.06 | 0.03 | 0.55 | 0.55 | CNFpred | ----------KPLFRELIETAEKLSKIQYNGEIKSDNIDHPNIALFCDLVVAEIKKAHITDRFTLQSFDVRALEYMHSQYPDIKLSYLVETKGTLKKQLEKLFTPAVYSPD----------------------------------------------------------------------- | |||||||||||||
10 | 5cx8A | 0.06 | 0.05 | 0.90 | 0.83 | DEthreader | QPYTQTKQNRDGLYALLRNTENPRHFYQELQS-FGIAGYFVYNRLNQQANAFVTASFLAGKVLQALLVSDYAYAVVYPLIFEIYRSFTATAAPKYNVKKDKGYLVNKFLE-D---KAYRDVQDKP---NLK--VGARYFSAEVYLILVESALQT--A-EALQAERTR-EL-----IGEGSRD | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |