>PF17371 (653 residues) PSSKCISTLATLLADGFFNMSPLSSTVEKVHGAPHQHRSECEARDLFTLIELLYPDCFVA EALPRALLALRRAESTTPRAWQSSYSATRAVSPSNSPQAAVSLSRGWKSPPAQDARNGDD GFGGEEVAEPAQCLLPSTDPPSSFLVESRSGLPVPLADVHSPTKSSVSELTLDPAHLANS SVAPGAAVLAGMMVPEVDPVPLAVEGMNDLLACRRSLATVLLSSLNEALHDVQYRELERS RPTAKERAVPQSSSEAVALRISSEVLLTAKMLLMSVMAASEVWRRRAVKAYTDAEKSNEA TPVSQLPSPYLVLHELFEQDESIAAQFTAIPVEEWTWGRDKESTARWYDQTLDRLLQSTE AAGVHLDAFLQSSKTFSTQQGEAVSHAPTLLLHRPSDGRPAVELNLSFMDTLNCAVPLPA MPLQLGEVQLLLHPRVVRETKAGVTVSSRGHELLFDAAASPTADFLQSCVSSPCPWTMLQ ESGGELPAHFRHRFHEFSPSERNMIKTFLEDSHLLGAFLEKNAPMLARVTLWCDGQWPTS TAVSRSGNTDLGGDASAVVEAAATSGGGSDLAAEIKDAVMFRRPFNAAVGRYVREMVVLN GFDQDTLERWICHICRNVACDDAFPAHKAVFAALVKFAALQCKWTWTSAVDEL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | PSSKCISTLATLLADGFFNMSPLSSTVEKVHGAPHQHRSECEARDLFTLIELLYPDCFVAEALPRALLALRRAESTTPRAWQSSYSATRAVSPSNSPQAAVSLSRGWKSPPAQDARNGDDGFGGEEVAEPAQCLLPSTDPPSSFLVESRSGLPVPLADVHSPTKSSVSELTLDPAHLANSSVAPGAAVLAGMMVPEVDPVPLAVEGMNDLLACRRSLATVLLSSLNEALHDVQYRELERSRPTAKERAVPQSSSEAVALRISSEVLLTAKMLLMSVMAASEVWRRRAVKAYTDAEKSNEATPVSQLPSPYLVLHELFEQDESIAAQFTAIPVEEWTWGRDKESTARWYDQTLDRLLQSTEAAGVHLDAFLQSSKTFSTQQGEAVSHAPTLLLHRPSDGRPAVELNLSFMDTLNCAVPLPAMPLQLGEVQLLLHPRVVRETKAGVTVSSRGHELLFDAAASPTADFLQSCVSSPCPWTMLQESGGELPAHFRHRFHEFSPSERNMIKTFLEDSHLLGAFLEKNAPMLARVTLWCDGQWPTSTAVSRSGNTDLGGDASAVVEAAATSGGGSDLAAEIKDAVMFRRPFNAAVGRYVREMVVLNGFDQDTLERWICHICRNVACDDAFPAHKAVFAALVKFAALQCKWTWTSAVDEL | |||||||||||||||||||
1 | 3uu1A | 0.06 | 0.03 | 0.47 | 0.59 | DisCoVER | WPQILGRLTDNRDLARGQAAWAMDQIM-------TGNAPAQIAAFAVAMTMKAPTADEVGELAG--VMLSH-------------AHPLPTVPDDAVDVVGTGG-DGVNTVNLSTMAAIVVAAAGVPVVKHGNRGGADTLEALGVRIDL---GPDVARSLAVGIGFCFAPRFHPSYRHAVRGVPTVFNLLGPLTNPARP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAGLIGCAFADLAEVMAGVFAA-RRSSVLVVHGDDGLD-ELTTTTTSTIWRVAAGSVDKLT---------------FDPAGFGFARAQLDQLAGGDAQANAAAVRVLGGDAVVLNAAGAIVAHAGL-----------------------------------------------------SWLPAWEEGLRRASAAIDT-------------------------------------------GAAEQLLAR- | |||||||||||||
2 | 3m1iC | 0.08 | 0.08 | 1.00 | 0.56 | CEthreader | VQQKQAQEILTKFQDNPDAWQKADQILQFSTNPQSKFIALSILDKLITRKWKLLPNDHRIG-IRNFVVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEWPQNWPEFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSAEQMTQAKALHLKNSMSKEFEQIFKLCFQVLEQGSSSSLIVATLESLLRYLHWIPYRYIYETNILELLSTKFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKQQIATSVMPVTADLKATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEERELFKTTLDYWHNLVDLFYEPLKKHIYEEICSQLRLVIIEKESDTIQLYKSEREVLVYLTHLNVIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLTVKKRGVVGQYPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMKYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIIISEERSVAERNRLLSDLMQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGHIYYNMLQLYRAVSSMISAQVAAEGLIATKTPKVRGLRTIKKEILKLVETYISKA | |||||||||||||
3 | 6xteA | 0.08 | 0.07 | 0.93 | 0.87 | EigenThreader | HPSIRTLSARATAAFILANEHNFLQAVNDSCYQNDD-----SVLKSLVEIADTVPKYLRPHLEATLQLSLKLCGDTSLNNMQRQLALEVIVTLSETAAAMLRKHAQTIPQMLAMMVDLEDFDSNAVAGESALDRMACGLGGKLVLPMIKEHIMQMLQNPDWKYRHAGLMALSAIGEGCHQQMEGILNEIVNFVLLFLQDPHPRVRYAACNAVGQMATDFFQKKFHEKVIAALLQTMED-------QGNQRVQAHAAAALINFTEDCPKSLLIPYLDNLVKHLHSIMVLKLQELIQKGTKLVLEQVVTSIASVADTAEEKFVPYYDLFMPSLKHIVENAVQGKTIECISLIGLAVGLLLKTQTDFPQEFQQYLPVVMGPLMKTASIKPEVALLDTQDMDDGWEFVN---------------LGDQQS---FGIKLIKAIGTEPDIMHSFAKCIEVMGDGCLNNQELRQVKRQDEDYD-----------------EQVEESLQDEDDNDVYILTKVSDILHSIFSSYKEKVLPWFEQLLPLIVNLIPHRPWPDRQWGLCIFDDVIEHCSPASFKYAEYFLQYVCDNSPEVRQAAAYGLGVMAQYGGEALPLLVRVIQSADSKTKENVNATENCISAVGKIMKFKPDCVNVEEVLP | |||||||||||||
4 | 1uw4B | 0.04 | 0.01 | 0.24 | 0.28 | HHpred | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RPPLQEYVRKLLYKDLSKVTTEKVLR---QMRKLPWQD--QEVKDYVICCMINIWNV---KYNSIHCVANLLAGLVLYQE---------------------------DVGIHVVDGVLEDIREVNQRRISSAKFLGELYNYRMVESAVIFRTLYSFT-SFGVNGSPSSRIRLVCTILDYVWWKKVWPFPIDIDY- | |||||||||||||
5 | 4c0oA | 0.16 | 0.10 | 0.61 | 0.60 | MRFsearch | -SMECFAQLYSTLKEVLFIMAAIAKSV--------DPENNPTLVEVLEGVVREMSEVVDRPQFLDPVLGYLMKGLC--------------------------------------------------------------------------------------------------------------------------EKPLASAAAKAIHNICSVCRDHMAQHFNGLLE--IARSLDSFL---------LSPEAAVGLECLSELCSVQVMALKKLLSQPTVFLDRLAVIFRHTN--------PIVHPCQKVIQEIWPVLSETLNKHRA--------------DNRIVERCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYHVHQH--------------SCFLYLG--------------------------------------------SILVDECRQGLLDMLQALCIPTFQLLEQQNGLQNHPDTVDDLFRLATRFIQRSPVTLLR-SQVVIPILQWVMRFLRDLIHTGVAN---------------DHEEDFELRKELIGQVMNQLGQQLVSQLLHTCYTLPDVAEVLWEIMQV---DRPTFCRWLENSLKGLPTVTHKEECKQVCWALRDFTRLF------------ | |||||||||||||
6 | 6vacA | 0.13 | 0.11 | 0.89 | 1.09 | FFAS-3D | --SDELHYLEVYLTDEFAKGRKVADLYELV-----QYAGNIIPR-LYLLITVG--VVYVPQSRKDILKDLVEMCRGVPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDIMQHQGHSRDQLEGVNVERYKQIVLTGILEPDEFHLQTLNPFLRACAELHQNVNIALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIMPSEDVVSLQVSLINLAMKCVDYVDKVLETT-VEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQFADEQSL--VGRFIHLLRSDDPDQQYLILNTARKHFGA---GGNQRIRFTLPPLVFAAYQLAFRYKEN------SQMDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFM-----SQAFSLYED----EISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQC--ALAASKLLKKPDQ--GRAVSTCAHLFWRVME-----------CLKKALKIANQCDPSLQLFIEILNRYIYFYEKTI---QVLNQLIQK-----------IREDLPNLESSEETEQINKHFHNTLEHL--------------- | |||||||||||||
7 | 7abhu | 0.09 | 0.08 | 0.97 | 0.87 | SPARKS-K | GTPPMRKAALRQITDKAREFGLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTSALGIPSLLPFLKAVCKSKKSWQILMGCAILPHLRSLVEIIEHGLVDEQQKALAEAATPYGIESFDLKPLWKGIRQHRGKGLAAFLKAIGYLIEYANYYTREVMLILIREFQEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFNYRQLVDTTVELANKVGAAEIISRIVDDLKDE---AEQYRKMVMETIEKIMGDHKLEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPY---LPQICGTVLWRLNNKSAKVRQQAADLISRCQEEKLMGHLGVVLYEYLGEEYPIGMHKMT---------PPIKDLLPRLTPILKNRH----EKVQENCIDLVGRIADRGAEYREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAHDVLATLLNQNRVCTTVAIAIVAETCSPFTVLPALMNEYRV-PELNVQNGVLKGEMGKDYIYAVTPLLEDALMHRQTASAVVQHMSLGVYGCEDSLNHLLNYVWPNVF-ETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQG | |||||||||||||
8 | 4fgvA | 0.11 | 0.07 | 0.67 | 1.00 | CNFpred | TEKRFLVTVIKDLLGLTEMKR--------------GKDNKAVVASNIMYIVGQYPRFLKAHFLKTVVNKLFEFM--------------------------------ESHEGVQDM---------------DTFIKIAKQCRRHFVALQPSENEPFIEEIIRNIGKITCDL-------------TPQQVHTF--------YEACGYMVSAQRNQQERLLAELMAIPNAAWDEIIKAATMNPGILH----------EPDTIKIIGNIMKTNVSACSSIGPYFFPQIGR----------------------LYNDMLQMYAATSQLISEAVARDGEIATKMPKVRGLRTIKKEILKLVETFVEKA-EDLQAVRSQMIPGLLDSV-------LVDYNRNV-----PGARDAEVLKA---------------MTVIITRL---------GLMEDQVPAIMENVFECTLDMINKDFA---------------------EYPEHRVEFFNLLRAIN--LYCFPALLKLFKFVIDSCMWASKH------------------DNRDVETA------GLNMCLELINNIAEKTDV-QTCNAFFNQFFI-------RILQDVFFVLTDTDHKAGFKTQSMLLMRLFYFVHPA------------ | |||||||||||||
9 | 5yz0A | 0.07 | 0.04 | 0.58 | 0.67 | DEthreader | MAD--HVFVTGVEDSSFAYGLLMELTRA------------YL-AYADNSRAQDSAYKLGSNFAEWSASWAGYLITKVRHD------------------------------------------------------------------------------------------------------------------EDQQEYAEIMAVLKSTQTVFSMLD-----------------------------------------------------KAYTRAVMHFESF-I--------------KKQNIEHLGFLQKLYAEPDGVAGVSAI---------------------------EHESLGLLRAG--KS-GE-NTY-GKSTTE--VPLSASRGYEYIVRLHMLCELHSIKPLFVARLEMTNSYRAKE-LNKPDYNEMV--------GECWLQRVARKAGHHQTAASRLEERAKWL-SKGDVH---QALIVLQKGVELCFPENETPPEGKNMLIHGRAMLL-V--GR-FMEETA-N-F------------------E--SNAIM-K-KYKDVTACLPEDLAHFRSLQYGNQFIYQSMP---RMLTLWLDYGTYM-NDLGKINKVITEHTNYLAPYQFLTAFSQLISRICFLMEI | |||||||||||||
10 | 1b3uA | 0.12 | 0.11 | 0.86 | 0.64 | MUSTER | AADG-LYPIAVLIDE-------LRN--EDV-----QLRLNS-IKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQGTFTTLVGGPEYVHCLLPPLESLATVEETV-----------DKAVESLRAIS-HEHSPSDL----EAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLDDTPAAASKLGEFAKVLDNVKSEIIPMFSNLASDDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDWRVRYMVADKFTELQKAVGPEITKT--------------DLVPAFQNLMKCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHKSALASVIMGLSPILGNTIEHLLPLFLAQLKDECP--EVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELA---EDAKWRVRL------------AIIEYMPLLAGQ-LGVEFFDE---KLNSLCMAWLVDHVYAIREAATSNLKKVEKFGKEWAH-ATIIPKVLAMSGDPNYLHRMTTLFC--------NVLSEVCGQDITTKHMLPTVLRMAGDPVA-RFNVAKSLQKIGPI--LDNSTLQSEVKPILEKLTQDQD---VDVKYFAQEALTVLSLA---------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |