>PF17361 (222 residues) SSTDILVEETRDHTDNIVILEEDLISNSGGLNEENNTLENIQDNPKEDGFDFVVDENELV PEEPLHEVVHDEEVEDDVEDGVVEGAVTVMNVNGEEGMPKDVIVSKVVKPTETQKTVNEE DEKVKRPADFPAYEEIRKAKDMENEDPRATYVRDPEVVKSGEPDEDDWARKHSKSGKKVN DLIARFNNGAVFHGEKDNNRSAYKSDYGVGKGQGHIRQSVFQ |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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Seq | SSTDILVEETRDHTDNIVILEEDLISNSGGLNEENNTLENIQDNPKEDGFDFVVDENELVPEEPLHEVVHDEEVEDDVEDGVVEGAVTVMNVNGEEGMPKDVIVSKVVKPTETQKTVNEEDEKVKRPADFPAYEEIRKAKDMENEDPRATYVRDPEVVKSGEPDEDDWARKHSKSGKKVNDLIARFNNGAVFHGEKDNNRSAYKSDYGVGKGQGHIRQSVFQ | |||||||||||||||||||
1 | 4qnlA3 | 0.08 | 0.05 | 0.65 | 0.67 | DisCoVER | -GVKLPVRLSKEPNTRPAPVK---------QSNANDYGVFGEVL--SGTQFSKTADSVGYLA------VPR---------GLKKNTYIALNYNP---LTNVGVLVGVNAA------G-----NCIGTFWVVFGDTTR---------EDKGFKV------WEY--------------------TSSGAHTFTVESDDGTATTSAFSTTATSGYVGLYNPSYS- | |||||||||||||
2 | 6oriA | 0.05 | 0.04 | 0.77 | 0.83 | DEthreader | -----ASGNQENPGTY-DLQFNPKFEVYGKVDKKSRR-TFV-RINDRPTNIWKVNYINDGLFAPNGVI-TFEKNLDEIFK---RLMYRIYLVS----IVPIESTGYFLT----DQDDF-YNKLNYKIDELVVGIQ-M-HM-VQ------ADKVAYNVAFEGKKVALTKLIDFA-NASP-RPIV-VR--DSWLSDTNKKL-TYGTG-----------YYY--- | |||||||||||||
3 | 1vt4I3 | 0.07 | 0.07 | 1.00 | 0.69 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 4mtkA | 0.06 | 0.05 | 0.77 | 0.55 | EigenThreader | QPGSLTLNDYDPGARLEVRSNI----ARPHAAADYPLYDYPGEYVQSQDGEQYARAQHVRGIGAGHLFRLSG--YPRDDQNREYLVVGAEYRVVQELSQFESELDCIDAS------QSF-----RLLPQTPVP----------VVRGPQTAGPKGEEIWTDQYG------------------------RVKVHFHWDRSSCWIRVSQAWAGKNWGSMQIPRI | |||||||||||||
5 | 2ok5A | 0.21 | 0.19 | 0.92 | 0.37 | HHpred | -----VPPEGWNRTRHVIILMTDGLHNMGG--DPITVIDEIRDNPREDYLDVVFGVGPLVNQVNINALASKKDNEQHSLHESCMGAIKVSVYNINEFYDYDVALIKLKNKLKYG--------QTIRPICLPCTEGTTRALRLPPTTTQKEELLPEVYIKNGD--KKGSCERDAQYAPKVKDISEVVTPRFLCTGGVSPDPNTCRGDSGVVDVCKNQKQVPFH | |||||||||||||
6 | 2pffB | 0.16 | 0.05 | 0.28 | 0.85 | MRFsearch | ---------------------------------------------------------------------------------TQFKATHILDFGPKDGTGVRVIVAGTLD----------------------MGMDLYKTSKA---------------------AQDVWNRADNHFKDTYGFSILDI------------------------------------ | |||||||||||||
7 | 6ic4I | 0.12 | 0.10 | 0.83 | 0.32 | FFAS-3D | ------------------------VKNLSFNRGERVIYDNISLNIRRGQITAIMGPSGTGKTTLLRLIGGQLVPDQDIAQMSRQRARMGMLFQSGALFTDMSVYENVAFPIRAHTLSENLIAELLMPTELSGNRRVALARAI---------ALDPDLIMYDEPFAGQDPIVKGVLTRLIRSLREALDLTTII-VSHDVPETLSIADYIYVVAEGKIQGE--- | |||||||||||||
8 | 5jcss | 0.10 | 0.09 | 0.94 | 0.64 | SPARKS-K | EAADCFAGAIGEFKAL-----EPIIQAIGESLDIASSRISLFLTQHVPTLEN--LDDSIKIGRAVLLKEKKSMNSTLFAFTNHSLRLMVLLV-GETGTGKTTVVQQLAKMLAKKLNVSQQTETLGKPKTVAVPIQENFETLFNATFSLKKNEKFHKMLHRCFNKN-----QWKNVVKLWNEAYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWA | |||||||||||||
9 | 5vadA | 0.09 | 0.06 | 0.62 | 0.59 | CNFpred | ----------------VVIIPCGI---EEDKEALIAKCNDYRRRLLSVNIRVRADLRDNYSPGWKFNHWEL------------KGVPIRLEVGPRDMKSCQFVAVRRD--TGEKLTVAEN----------EAETKLQAILEDI----------QVTLFTR----ASEDLKTHMVVANTMEDFQKILDSGKIVQIP--------------------------- | |||||||||||||
10 | 2c0uA | 0.08 | 0.06 | 0.77 | 0.67 | DEthreader | ------AFAVLKRPFYTTIATALGLPV----SLQKFLKPFI---SG--EGEPLNGWDYGADLAC-V--VC--RVSDDPSKP--IL-EPLGHI--------T-TSG-HTRFTEFHVHL-CTPGLKAQVAFASAALVGAAIGTA--F--DKDCKRLETSRLLVWKAVTTLKVKLE---AQTKIYTTDVAVECVIDKAVGKSFPLLECLFDGGLRR--------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |