>PF17359 (221 residues) NGNFLMILIIIIPIVLVVVFIMRKKRKQNGENQTSVNNKDKSDTNEVWTTIKKYLRSIDD KGKEVIDSYVVKRAEPHNLVQMTKQQRIDYKNEQKAIKALKTTNPEQYKIEMERIKKEKR AKPKELYVVLFTTRNAKTLIIDEPRAIECEVRLVKINKKENRREIDVVRALDYEEEMLWI EPIKAKDDEIYNKRLEADKKKQQKAAQRRQKQLEKQKNKTN |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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Seq | NGNFLMILIIIIPIVLVVVFIMRKKRKQNGENQTSVNNKDKSDTNEVWTTIKKYLRSIDDKGKEVIDSYVVKRAEPHNLVQMTKQQRIDYKNEQKAIKALKTTNPEQYKIEMERIKKEKRAKPKELYVVLFTTRNAKTLIIDEPRAIECEVRLVKINKKENRREIDVVRALDYEEEMLWIEPIKAKDDEIYNKRLEADKKKQQKAAQRRQKQLEKQKNKTN | |||||||||||||||||||
1 | 6ly9N | 0.05 | 0.04 | 0.72 | 0.68 | DisCoVER | PMEKLVLAGP-KGRAKELLQSLQQ-----------AGVVHLETL--RPEALSAYQLEAEPARPFSPFLRVIPFLLTEKELPLVEEALRKALEDR-------------YL--L--AH--EAYGGVAALVVVHRKWTRRLLEASGRFGFALLGYVPVK--AKPKVEEALA------RHKESVVYA--F---EP--VD--EHHEADRIP--VV-LD-------- | |||||||||||||
2 | 4a01A | 0.06 | 0.05 | 0.77 | 0.83 | DEthreader | --------------------ISEGATSFLFTEYKYVGIFMLGGVTSLVSGFLGM-KIATYANARTAFGAGFALYSSLIVSSVGILVCLLTTLFATDFFEIKAVKIEPALKKQLVISTVLMLGMLSTGIDYGSDAGGIEMIRTALDGTIGFASAASALLVMPLGVAISN-GADNAKYGDTIGDPL--DT--SG-SLN--I---------------------- | |||||||||||||
3 | 5x5yF | 0.10 | 0.10 | 1.00 | 0.48 | CEthreader | EVLVTMSAVSAVLLVIIMSGRFIKYLAQAAQGLLDPGSLFLIMAFRIPGFLQLILPLGLFLGAPALLVAILVAWLSLFLAPQGINQFALLLNKQDTLTEFDTLVPGRFQATRVTYTEELSKDRGELAGIFISQKDLSNQERGISILVAEKGTQNIQADGSRYLILHNGYRYDGNPGQANYRAIQYDTYGVMLPKPDAVPTADLFGSDNPRYQAELQWRLST | |||||||||||||
4 | 5eo6A | 0.09 | 0.07 | 0.76 | 0.67 | EigenThreader | HPTSTDIQRVREFLLDLQARICAGLEQQEKAGGGTAEFKLP-------ASATERHP--QIAGAKAQALGVSLVIHPK-------------------------NPN----------------IPTSHANVRLFVREDQDP---IWWFGGGFDLTPLKHRDEQRGVGLFFLNTCFKYIQAVGNGYLNAILPIFEKHRAQREFQLYRRGRYVGTLFGLQTGGRI | |||||||||||||
5 | 3mk7C | 0.09 | 0.06 | 0.69 | 0.43 | HHpred | MSTFWSGYIALLTLGALFWLIFATRKGESA-------GTTDQTMGHAFDGIEEY---DNPLPFGILYLVLYPGGGWT--------QEKQWEREVAQADEKYGPMGARLFNYCSICHGSDAKGS----------LGFPNLADQDWRGDAASIKT-SILNG-------RIAAMP-----AWGQAIGEEGVKNVAA---------------------------- | |||||||||||||
6 | 6o7ua | 0.09 | 0.06 | 0.72 | 0.58 | MRFsearch | --GYVNQLRRFDEVERMVGFLNEVVEK-----------------------------------------------NVNDMVKEITDCESRARQLDESLDSLRSK-LNDLLEQRQVIFECSKFIEVNYMITGSIRRT---------GNLIFQNFPIEV---EKDCFIIFTHGETLLKKVKRVIDTLNRQIDDLQRILDTTEQTLHTELLVIHDQLPVWSAMTK | |||||||||||||
7 | 6rz6A2 | 0.08 | 0.05 | 0.53 | 0.58 | FFAS-3D | ---IALVVGCLLPFFTLSICYLL-----------------------IIRVLLK----------------------------VEADLEDNWETLNDNLKVIEKAAAQVKDALTKMRAAALDAQMKD------------------------------------------------FRHGFDILVGQIDDALKLVKEAQAAAEQLKTTRNAYIQKYLVSHRKA- | |||||||||||||
8 | 4uosA | 0.17 | 0.13 | 0.76 | 0.65 | SPARKS-K | IKKMLEKAIKKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAELKKVKELDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENG---------------------------------------------------EDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVG-- | |||||||||||||
9 | 4ph4B | 0.11 | 0.08 | 0.74 | 0.55 | CNFpred | EQDLCTFLISRLANYLYWYVIVECEDQDTQQRDPKT--------HEMYLNVMRRFSQALLKGDK----------SVRVMRSLLAAQQTFVDRLVHLMKAVQREKNERLQALLGDNEKMNLSDVELIPLVKIRGIIPETATLF-LMPAQLFFKTED----GGKYPVIFKHGDDLRQDQLILQIISLMD---------------------------------- | |||||||||||||
10 | 3g61A | 0.07 | 0.05 | 0.71 | 0.67 | DEthreader | LE-EMTYAYYYTGIG-GV-----------------------MFFAMATFFGGFIIGTRGTLVILSPGAFSQA-AGVVEMKMLSGQALKDKKELEGSGKIATEAFETYASLQIPYNAMKKAVFGITFS--------------------TQA----------------MYYAFIVFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKTPE--YPFYDPMAGSV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |