Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | TFDVKSRMSFRVWVFAGTAGFGLIGAWLFYEAIKLESKYSLLYVGVGTFGVIYGLMTFLMVFPAFTKKGNIIFTIIEGEDGRIFSGKKSVLFKDIKSLKMAEHRYSPKGIFLMDILIETRGNGRVRIPTYNILPEPEFYKAVELYILPYMTEEARAEWIGQFTEAQR |
1 | 6idpA | 0.06 | 0.05 | 0.78 | 0.64 | DisCoVER | | IPATLP-RIACQFVLGFQLIALVTYVFATPLAELM-TSETEVSQILNLHLVIVPISLGALGICMLM---VSVANALG-----------------KSYVALTISALRLFAFYLCLWLGAHFYGIEGLFIGALVG---NI-IA---GWAAWAYQKALRSENL------- |
2 | 6kptA2 | 0.09 | 0.07 | 0.77 | 0.83 | DEthreader | | ----DVRSMTQKAYAEGLRAIYLYTATFQDVAQAHGVD-GDLAARVNDLLLPIVKGFGS-ET--------YAKLTE-----SLQTLGGYPIEQYIRDSKI-------------DSLY------EGTTIQAQDFFFRKIIGQALAYVAGEIFIRLATALADLTRQIEN |
3 | 5x5yG | 0.08 | 0.08 | 1.00 | 0.64 | CEthreader | | NDISASYGIGDALRFIFLTAPRRAYDMLPMAALIVMKPMLVLMLAGILVGEYVAPWTENIAQSGRALAQGGGDSQSSKRGLWHRQGREYIHINAVVLYGVTRYRFDEQRGLESASFAKRARFEQLEEVTTTLLHPRSEVVKLPTERWDAQLSPQLLNTVVMEPEALS |
4 | 5yxyA | 0.11 | 0.10 | 0.87 | 0.65 | EigenThreader | | GGFGKLPDSVLENMKRRLKEALPKAEYTFELFTKLEQYEFANNLAQALELVYFTERAIDLIDEALAKWPIRPR-----DEV----ALKD------GFGVSTTEAPRG--VLVYALKVEN--GRVSYADIIT---PTAFNLAMMEQHVRMMKLKLLAEMVVRAYDPCI |
5 | 5xbfA | 0.10 | 0.07 | 0.74 | 0.36 | HHpred | | -----CSRE--DAIHLAGLIYKA-----QFNNDRSASSEEWKKSILLALRWPTFGSAFFEV-KQTSEPDVILIAI--NRHGVLLIKTTTYPFTKISSWSSGS----------TYFHMALGSGSRLLCETS---LGYKMDDLLTSYVQQLLS---------------- |
6 | 5xbfA | 0.11 | 0.08 | 0.77 | 0.32 | MRFsearch | | -------NADTILHYHQEDAIHLAGLIYKAQFSQLASVPKILREWKKSILLAYDKHAKVAFLKWICRWPPDVILIAINRHGVLLILLTTYPFTKISSWSSG----------STYFHMALGSGSRLLCETS---LGYKMDDLLTSYVQQL------------------ |
7 | 4aw6A | 0.07 | 0.07 | 0.89 | 0.45 | FFAS-3D | | -------KDAIKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDK------FTPLPEGKLKEEIEVMAKSDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLCKNEEVLAVLGHELGHWKLGHTVKNIIISQ----- |
8 | 3pvlA4 | 0.07 | 0.04 | 0.54 | 0.65 | SPARKS-K | | ------------------------------------------------------SRFYEAYKFSGPPLPKSDVIVAVNWTGVYFVDEQELSFPEIMAVSSSRGTKMMAP----SFTLATIKGDEYTFTSS---NAEDIRDLVVTFLEGLRKR--------------- |
9 | 5xtcr | 0.07 | 0.02 | 0.34 | 0.69 | CNFpred | | ----------LKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTH---------------------------------------------------------------------------------------------------- |
10 | 3ikmD1 | 0.04 | 0.03 | 0.77 | 0.83 | DEthreader | | -YLPVNWERYLAEAQGTYEELQREMKKSLMDLANDAL-PGGASGPRALEINKMISFWRNAHKRISSQMVILVQALVGKLFGRFCISIHEVRYLTNFSAVD------------LRKEV---------MDCTPSNPTGMERRGIP--QG--EALDI-Q----------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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