>PF17343 (186 residues) MVKFYDPSQPEQYLSSPKLFGVLPIKLIVISMQILYMLLQIVWLTASGVTSKVSILLVIA SVILTAFTVAVFVVENKSLMQAHIWVASLFLFFPLAVFVLMIAQFFFDIKFLATFFGEGI YTHPITSLTVAAVFLCAYIAYLFLCHKLVEAKDQQPDDFPELDTTQGLFHYNRDAYDGSE RVNLIY |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MVKFYDPSQPEQYLSSPKLFGVLPIKLIVISMQILYMLLQIVWLTASGVTSKVSILLVIASVILTAFTVAVFVVENKSLMQAHIWVASLFLFFPLAVFVLMIAQFFFDIKFLATFFGEGIYTHPITSLTVAAVFLCAYIAYLFLCHKLVEAKDQQPDDFPELDTTQGLFHYNRDAYDGSERVNLIY | |||||||||||||||||||
1 | 1qoyA | 0.10 | 0.08 | 0.84 | 1.00 | DEthreader | VKNAI----------E-T--GALDLYNYLDQVI-PW-QTFDETIKELSRKSGDIKTLLMDSQDKYFEATQTVYWGKLNEAQKSLLVSSQSFNNASGKLLALDSQLTNDFSSYFSQVGPFGLSVQNFFTTLSNTVKQANKDIDAAKLKLTTEIAAGIKT-T--------LLKEAAKKMINT------ | |||||||||||||
2 | 6wvgA3 | 0.08 | 0.04 | 0.56 | 0.65 | DisCoVER | ----------SSLK-LLKYLFFF-NLLFWICGCCILGFGIYLLI-------------------------------------------------------------------HNNFGVLFHNLPSLT--LGNVFVIVGSIIMVVAFLGCMGSIKENKSLLMSFFLLLIILCVCVIEVLGMSFALLN- | |||||||||||||
3 | 1pgjA | 0.06 | 0.04 | 0.76 | 0.83 | DEthreader | ----FFPWRVAAV--AGSCV--KMYHNSGEYAILQIWGEVFDILAMGLN-NDEVAAVLEDWKSNFLK--------------------SYMLDISIAAARAKSYLTEH------SPGYTLKNKSSGEIKQLYDSVCIAIISCYAQMFQCLREMDNFGLNLFNPNI-----SNLCAFQ-VTAMF---- | |||||||||||||
4 | 6wvgA3 | 0.11 | 0.07 | 0.63 | 0.75 | CEthreader | -------------------SSLKLLKYVLFFFNLLFWICGCCILGFGLTLGNVFVIVGSIIMVVAFLGCMGSIKENKSLLMSFFILLLIILLAEVTLAILLFVF--------------------LYIGIITICVCVIEVLGMSFALTLNSQIDKTS------------------------------ | |||||||||||||
5 | 5odcF | 0.07 | 0.07 | 0.99 | 0.88 | EigenThreader | TPRICGICQVAHHLAGVKIPETAELLRNLMHQGATVHSHALHFYMLFPTTDDEIIKDAIELRKAGQNVVRVVGGRAIHERDELLKLSERTIELSEKSIEVGKKLLENIKDEFVKEFGKPCHHPMLFHYARLIELLSSAEMVKELLENDKIVG--EDIRAEPEEVVGDGVGCVEAPRDDGIATVQNN | |||||||||||||
6 | 6wvgA | 0.11 | 0.10 | 0.92 | 0.29 | HHpred | -------NILGHKLEYNMGMSSKLLKYVLFFFNLLFWICGCCILGFGIYLGNVFVIVGSIIMVVAFLGCMGSIKENKSLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAKGLTDNSKVEGNFLYIGTICVCVIEVLGMSFALTLNSQIDKTSNSHNVYITKQKNGNHNVEDGSV-------- | |||||||||||||
7 | 6wvgA | 0.10 | 0.08 | 0.73 | 0.47 | MRFsearch | ------------------KYVLFFFNLLFWICGCCILGFGIYLLIHNLTLGNVFVIVGSIIMVVAFLGCMGSIKENKSLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAKGLTDSFHSNFLYIGIITICVCVIEVLGMSFALTLNSQIDK-------------------------------- | |||||||||||||
8 | 5uz7R | 0.08 | 0.06 | 0.72 | 0.82 | FFAS-3D | ------------------------LAIVGHSLSIFTLVISLGIFVFFRSLGCQRVTLHKNMFLTYILNSMIIIIRDPVSCKILHFFHQYMMACNYFWMLCEGIYLHTLIVHAITRLSVETHLLYIIHGPVMAALVVNFFFLLNIVRVLVTKMRETHMY---------------------------- | |||||||||||||
9 | 4hg6A | 0.10 | 0.10 | 0.99 | 0.77 | SPARKS-K | MLLLKNPLFRRGLGIAQRLYLNSMSFWFFPLVRMMFLVAPLIYLFFGIFVATFEEVLAYMPGYLAVSFLVQNALFARPLVSEVYEVAQAPYLARAIVTTLLLLFTFLLCLSGVLATLVRWVAFRSVLLVVGGWAVLNVLLVGFALRAVAEKQQRR--AAPRVQMEVPAEAQIPAFGNRSLTATVLD | |||||||||||||
10 | 3rkoB | 0.09 | 0.05 | 0.61 | 0.90 | CNFpred | -------------------AGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAI-----------------FHLMTHAFFKALLFLASGSVILACH------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |