Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MKELTFETLIAVFEEIFGRGLFWVMVAVAVVVTLAYLYVLIRDRSVSWRKFLWAQLSMPVGAVLAVLFVLRMTRSGVSDMGGPIDVIVLLGVAAAGAVGLAILVYTVESLI |
1 | 4a01A | 0.05 | 0.05 | 0.92 | 1.00 | DEthreader | | VRNI---PEDDPRNPAVINVGDNVGDIAGMGSDLSAISAALVSLAFVLIGAMLPYWFSAMTMKSVGSAALKMVEE------KAAVIGDTIGDPLKTSGPSLNILIKLMAVE |
2 | 6s3qA | 0.05 | 0.05 | 0.95 | 1.00 | DEthreader | | AIIVE-WEIFRKLGLYMA-TVLTGLAIHSIVLPNPFRFAMG-NNQVDKRITRFVLVGATINM-DGTALYEAVAAITMVVTLIAVDWLL-DRFRTMVNVLGDAFGTGIVEKK |
3 | 5mlzA2 | 0.15 | 0.10 | 0.66 | 0.59 | DisCoVER | | --------------------------DRIVKFS-TFKDIRRGSIFSRLLKFHIAALSGAVVNFIVYWILL----------FLGIHYLIANLVGIVLSFGVRYVINRHVTW- |
4 | 3gi9C | 0.08 | 0.06 | 0.82 | 1.00 | DEthreader | | ----------KKLSEAMGRAEFFIVLVKLLILGLFIFAGLITIHPSVIPD-VM--SIFFLS-YMGFGVITN-ASE-----PKKNVPRAIFISILIVMFVYVGVAISAIGNL |
5 | 2yvxA | 0.08 | 0.08 | 1.00 | 0.41 | CEthreader | | LQGFESVLEAVTALAFYVPVLLGTGGNTGNQSATLIIRALATRDLDLRDWRRVFLKEMGVGLLLGLTLSFLLVGKVYWDGHPLLLPVVGVSLVLIVFFANLVGAMLPFLLR |
6 | 5xu1M2 | 0.10 | 0.10 | 0.97 | 0.60 | EigenThreader | | QDESVVFAEIQQMTTIISSIAGISLFVGGTGVMNIMLVSVTERTRERANILIQFLIESMILTLIGLTIASGLTALAGLVGV---SIPVALFSSASVGMIFGVLPANKASKL |
7 | 5jsiA | 0.14 | 0.11 | 0.76 | 0.28 | HHpred | | -------------EELTYRLFM-VATVGMLAGTVFLL-ASSREVKPEHRRGVYISAVCGIAWYHYQKMGASWESGSYDTGLRYVDWVLTVEVLAVTRKG------------ |
8 | 3wajA | 0.19 | 0.18 | 0.97 | 0.18 | MRFsearch | | ---QMAYPVIAGITIGLYVLSWGAGFIIAPIILAFMFFAFVLAGFVNADRKNLSLVAVVTFAVSALIYLPFAFYPGFSTIYSPFQLLVLLGSAVIAAAPLAVIVLTALIMG |
9 | 5o0tA | 0.13 | 0.13 | 0.95 | 0.72 | FFAS-3D | | ------SAYIKYYIENNWVKIAFLALYVFVNMFFFMSAVEKYESQGANLYVQIARGCGATLNLNGALILIPMLRHFMTWLRKPIDESIEFHKLVGQVMFALAIVHTGAHFL |
10 | 6a2jA3 | 0.12 | 0.12 | 0.94 | 0.96 | SPARKS-K | | ---PLQIGKKMQFHMIGILIYSYIVVLLLFVWIIVAAVHAITSYK-DQKQIFWGWISCLIFITLQALSGIMIVYSELAL---GFALAHSFFIACLFGVLCYFLLLIARFRY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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