Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | EQTEKKSWFKKALEKYDQFCDELGVNQGACRGCVPVVKFDPEPEKEQKAEKKE |
1 | 1yvlB | 0.06 | 0.06 | 0.98 | 1.00 | DEthreader | | LLKKMYLMLDNKRKEVVHKIIELLVTFSFQILELLMAAEFRLLS-PVVVISGS |
2 | 5vmsA | 0.02 | 0.02 | 0.92 | 1.17 | DEthreader | | AAIKVIRRMQYFVAKKKFQQARKPY--DVDV-EQ-SQGHLNLMVRIKELQRRL |
3 | 1dp7P | 0.33 | 0.02 | 0.06 | 1.00 | DisCoVER | | ---------------------EQK----------------------------- |
4 | 1y1uA | 0.02 | 0.02 | 0.94 | 1.00 | DEthreader | | WLQREAQTLQQYRVELAEKHQKTLNITDIVKLNVHLSAHFRNM--VL-VVVDA |
5 | 2i2xA | 0.06 | 0.06 | 1.00 | 0.51 | CEthreader | | LAHTIAVIARAISAPRSLVAYEAGAVGPGKDCGMPMTMEGKTSTCAHSDVMGN |
6 | 1syyA | 0.04 | 0.04 | 1.00 | 0.57 | EigenThreader | | THTFLYICESLGKDDFQMEIEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQNK |
7 | 1wvuB3 | 0.23 | 0.13 | 0.57 | 0.32 | HHpred | | ---GNPAQVQSRINKFTQFTQILGTTTGPNLSC-------------------- |
8 | 4l3iA | 0.12 | 0.11 | 0.96 | 0.48 | MRFsearch | | --ERLIKSISVCQKELNTLCSELHVEPFQEEGETTILQLEKDLRTQVELRKQK |
9 | 1wvuB3 | 0.22 | 0.13 | 0.60 | 0.40 | FFAS-3D | | -NGGNPAQVQSRINKFTQFTQILGTTTGPNLSC-------------------- |
10 | 1ahvA4 | 0.08 | 0.08 | 1.00 | 0.83 | SPARKS-K | | IAKVSGEDAMMQYAVTKKRCQEAGLDFIGEMHHIVCIVFNKKDLIQKRKVQWL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|