>PF17316 (256 residues) NSPTLNHLYKYPVVSRTLNQVVSTPVISQLLSVIVLVVASVRHTLVDSEYSPKFVKIGYN AISGFGLRFDELVNVLFLREGIDAFLRGWDSHSHKPGFWLLFFWVDYVANVSNILLKQFV VQPFKLNVEDKREEDTKSDGTLPHVSELSSTTKSISKDLQSKLQSDYIGPTTDFARQKYD SLVKPTADKLQSEYIEPTRAQLNKVTEPTRAQAMETYKMVSNAYENNFNKSESVPRAVVN TGIDLKNFTIENLRSN |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | NSPTLNHLYKYPVVSRTLNQVVSTPVISQLLSVIVLVVASVRHTLVDSEYSPKFVKIGYNAISGFGLRFDELVNVLFLREGIDAFLRGWDSHSHKPGFWLLFFWVDYVANVSNILLKQFVVQPFKLNVEDKREEDTKSDGTLPHVSELSSTTKSISKDLQSKLQSDYIGPTTDFARQKYDSLVKPTADKLQSEYIEPTRAQLNKVTEPTRAQAMETYKMVSNAYENNFNKSESVPRAVVNTGIDLKNFTIENLRSN | |||||||||||||||||||
1 | 4tvsA | 0.07 | 0.04 | 0.59 | 0.61 | DisCoVER | ---------------VETTAVEFQNQMTFLEKHLQ--PAILL--LTAARDAEEALRCLS----------EQIADAYSSFRSVR-AI----------RID--GTDKATQSDTVKLEVDNGFNGQNAAVV-----------H-RFES-FPAGST-LIFYKY--------CDHEN-AAF-KD-VAL------------------V--------------L--TV--LL-EEETLVEVLKFTNSNWSRISHLVL-PVQP- | |||||||||||||
2 | 5mrwA | 0.07 | 0.05 | 0.73 | 0.83 | DEthreader | ----------IATFLLVLMVLARP-LGSGLARLINDI---DREMNW-----KQYLCATLGNAWVDLLRITLVLVPVALLI--FF--QA--AEA-KMLGTNAIFLIPTALCFAFGEVMGDRRRLWSFVV---RFVSSAVTTAALMGEVGYGMMLFVLVF-PEYLG-------------KKID--EMLTALAILVTPTLVLMGASVLYASNGSA-LACMFVGR-FG-----------VI--------IPVMAIAGS-- | |||||||||||||
3 | 2efkA | 0.06 | 0.06 | 0.95 | 0.46 | CEthreader | QFEVLERHTQWGLDLLDRYVKFVKERTEVEQAYAKQLRSLVKKYLPKESKFSQSFVQILQEVNDFAGQRELVAENLSVR-VCLELTKYSQEKQERKHQLENGFKQLENSKRKFERDCREAEKAAQTAERLDQDINATKSHAEESKNEYAAQLQRFNRDQAHFYFSQPQIFDKLQDDERRATRLGAGYGLLSEAELEVVPIIAKCLEGKVAANAVDPKNDSHVLIELHKSGFARPGDVEFEDFS------------- | |||||||||||||
4 | 1ciiA | 0.06 | 0.06 | 1.00 | 0.68 | EigenThreader | RDKEITAYKNTLSAQQKENENKRTEAGKRLSAAIAAREKDENTLKTLRAGNADRQEFRLLQAELREYGFRTEIAGYDALRLHTESRMLFADADSLRISKRQKDAQNADKKAADMLAEYERRKGILDTRLSELEKNGGAALAVLDAQQARLLGQQTRNDRAISEARNKLSSVTESLNTARNALTRAEQQLTQQKNTPDGKTIVS-PEKFPIDNRANLNYLLSKKIYNAEVAEWDKLRQRLLDARNKITSAESAVNSA | |||||||||||||
5 | 2pffB | 0.14 | 0.12 | 0.86 | 0.45 | HHpred | ---SLEHVLLVPTAS---------------FFIASQLQEQFNKIADDEPTTPALVGKFLGYVSSLVGQFDQVLNLCLTGNDIHALAAKLLQENDTT----LVKTKE---LIKNYITARIMARPFDKKSNSALFNAGGQGNTDDYFEELRDLYQT-YHVLVGD----LIK----FSAETLSELIRTTLDAEKLEWLTPDKDYLLSIPISCAHYV--VTAKLLGELRSYLKGATGHSQGLVTAVDSWESFFVSVRKA- | |||||||||||||
6 | 3s84A | 0.11 | 0.09 | 0.84 | 0.50 | MRFsearch | --------KLKEEIGKELEELRLLPHANEVSQKIGDNLRELQQRLE--PYADQLRTQVNTQAEQLRRQLTPYAQRMSLQASLRPHADELKAKIDQNVEELKGRLTPYADEFKVKI--------------------------DQTVEELRRSLAPYAQDTQEKLNHQGLTFQMKKNAEELKARISASAEELRQR-LAPLAEDVRGNLRGNTEGLQKSLAELGGHLDQQVE---EFRRRVEPYGENFNKAQMEQLRQK | |||||||||||||
7 | 3i9wA | 0.11 | 0.10 | 0.95 | 0.70 | FFAS-3D | --PTMNMARQ---LSEASAWELFAQAQGRMLTAQSLKINALLQALREQGFDTTAIEQQEQEISRSLRQQGELVGRLQLRQQQQQLSQQIVA--------AADEIARLAQGQANNATTSAGATQAGIYDLIEQDQRQAAESALDRLIDIDLEYVNQMNELRLSALRVQQQKNAPTLEKQLNNAVKILQRRQIRIEDPGVRAQVATTLTSQYSDLLALYQQDSEISNHLQTLAQNNIAQFAQFSSEVSQLVDTIELRN | |||||||||||||
8 | 6w2vA | 0.13 | 0.11 | 0.80 | 0.64 | SPARKS-K | -------ATDKEEVIEIVKELAELAKQSTDPNLVAEVVRALTEVAKTSTDT--------ELIREIIKVLLELASKLAVLEALQAVAELARELAEKTG--------DPIAKECAEAVSAAAEAVKKAADLLKRH------PGSEAAQAALELAKAAAEAVLIACLLALDYPKSDIAKKCIKAASEEASKAAEEAQRHPDSQKARDEIKEASQKAEEVKERCERAQEH--PNAGWLEH-------------------- | |||||||||||||
9 | 4fgvA | 0.09 | 0.08 | 0.88 | 0.76 | CNFpred | SEWSWHNCNVLCWAIGSISMAMNEETEKRFLVTVIKDLLGLTEMKR-----KDNKAVVASNIMYIVGQYPRFLKWKFLKTVVNKLFEFMHES----HEGVQDMACDTFIKIAKQCRRHFVAL--------------QPSENEPFIEEIIRNIGKITCDLTPQQVHTF----YEACGYMVSAQGRNQQERLLAELMAIPNAAWDEIIKAAILHEPDTIKIIGNIMKTNV----SACSSIGPYFFPQIGRLYNDMLQM | |||||||||||||
10 | 6ar6A | 0.03 | 0.02 | 0.76 | 0.83 | DEthreader | KTVVESAINDLERE-LN-------------------DF-EMTKLEIMIFSSISKTISQSTEMASLWSFDARAKAQFEEYKRSLGEDDNL------------GKDENTDIFMTYPGKVEISFTVKSEERIEEAKNIIKFN-LNAAFLLPTIIATVSLAAILEIMAVKLNPGFVINILLTLKLNSVFIEFICQPYFLQNMVNKVPEVVKIRF-VFFVSEIILSF-D--------FNQSGV------------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |