Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | PAEFAGADYQLSDKNAKQWAIASKQAEQCIYPNLTRIQQQHFAKEDSYIHSQYIFFYPLEKIIGEDYVKIIQNDEKSMNYATYQFKKFRTEIANVEPLENKNCLILRTQARDDLDVVKGQYKNGMVDNSKNEDGTQKNTDGVATNQNKFFFDIIKWGSALLL |
1 | 3o10A | 0.08 | 0.06 | 0.72 | 0.62 | DisCoVER | | -------------------GS--VG-NPVEARRWLRQA--RA-----NFSAARN----D---LHKNA--NEWVC-FKC-YLSTKLALIAADYAVRGKSAQKIEEQLE-GLTNDVHTLE-AY-GVDSLKTRYPDLLPFPQIPNRF-TSEVARVCTACIIIKL- |
2 | 3qe7A | 0.01 | 0.01 | 0.75 | 0.83 | DEthreader | | -----------QHFAMFGTVLLNGIGTLLYLFICGKIPVKLLRGLHRSMFANGLSTVSGGST--P--N--T------TYGENIGMYSTWVGAFLLSAIQPLVMGGVSLLYGVIGASGIRVLISKV-TSILIIAKV-ELKGMALATI---------------- |
3 | 6q4sA2 | 0.05 | 0.05 | 0.91 | 0.46 | CEthreader | | DLAARGLEGTLGLDEYAEFRRRTVGIHHSIDAGERSRGFEVPAQAMGHPVMERMRDLAADTIGFMNDIHSFEREGHN--LIAVLRRERGCSWQQATDEAYRMTIACLDEYLELQERVPQMCDELRLDEAERD-------------RVRMGVEAIQHWINGNY |
4 | 3dxjP1 | 0.09 | 0.07 | 0.80 | 0.68 | EigenThreader | | PKEHKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLS----FLDLIQEGNQGLIRAVEKF-------------------------EYKRRFKFSTYATWWIRQAINRAIADQAINKLSRTARQLQQELGREPTYEEIAEWDAKRVEETLKIA----Q |
5 | 4dvyP1 | 0.20 | 0.10 | 0.52 | 0.26 | HHpred | | ---MQKDPSKINTRSIRNF------MENIIQPPIPDD------KEKEFLSAKQSF---AGIIIGNQ----IRTDQKFMGVFDESLKERQEAEKNGGPTGGDWLDIFL------------------------------------------------------- |
6 | 3jcoR | 0.11 | 0.07 | 0.65 | 0.45 | MRFsearch | | ------------EVSEKAFLLTQS--------------------KVSIEQRKEAAEFVLAKIKEEE----------MAPYYKYLCEEYLVNLNEWIKFDQELYNELCKKNESKIKELNEKIQKLEEDD---------------EGELEQAQAWINLGEYYAQ |
7 | 2gfpA1 | 0.09 | 0.07 | 0.82 | 0.62 | FFAS-3D | | ------RDLNVREGAVQ-SVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMSSLTVLIAASAMQGMGTGVGGVMARTLPRDLYERT----QLRHANSLLNMGILVSPLLAPLIG----GLLDTMWN--------------WRACYLFLLVLCAGVTF |
8 | 4uosA | 0.10 | 0.10 | 0.96 | 0.67 | SPARKS-K | | ------GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKKEIKKMLENGEDSEKILKKAKEMEKILKMVIELAEKILK |
9 | 4a0cC | 0.05 | 0.04 | 0.69 | 0.59 | CNFpred | | --------------HVNKRLEEEDRLITYLDQTTQKS--------LIATVEKQLLGEHLTAILQKGLNNLLDERIQDLSLLYQLFSRVR-----------GGVQVLLQQWIEYIKAFGSTIVINPEKD------------------KTMVQELLDFKDKVDH |
10 | 3fr8B | 0.09 | 0.07 | 0.83 | 0.83 | DEthreader | | AVGA-AMPSTEQEYKSDIFGERGLGAVHGIVEALFRYANEGKEFNKAYSASFYPCMDILYECYED-AQEVLRKKGHSYSEIINESIESDSLNCSARLGSRKWAPRFDYILTQQAFVTVDK-DAP---------------------INQDLIS-NFMDPV--I |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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