Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MDNKKEDGSSKSDSSKNGENSKNNKLMSSFSSVTSSTGEALQNCTESEWDASDEPYSAELLNVKKKPNRVNVFSATEKNMETVIVTEVSPPQTPLQPKPVIEHHNLARLIQKSCQLLLEKTTAEGTEVHLKMEFPDWRD |
1 | 1j57A | 0.09 | 0.06 | 0.67 | 0.75 | DisCoVER | | STKTNSE-----ILEQLKQAS-DGLLFMSESEYP--FEVFLWES---AEIVLQGHGFKVVDIDEVIKSNLNPQVYR-LGEVELDV--------------------Y--VI-GE--TP-AGN----LAGISTKVVE---- |
2 | 6wy9B | 0.04 | 0.03 | 0.73 | 0.83 | DEthreader | | LQRQITDHADLWRLAGLGVALGGALCLEEQVLTRTVPS-----------------------TTSRDM---------LDVARTAALGSGHITALQLADIEAMCAWWADGGLNVVHRTQHLHGGIDVYPIRYWG-I--T-- |
3 | 3n0vA | 0.05 | 0.05 | 0.97 | 0.48 | CEthreader | | AHWHKIPYYHFALDPKDKPGQERKVLQVIEETGAELVILARYQVLSPELCRRLDGWAINIHHSLGVKVGATAHYINNDLDEGPIIAQGVEVVDHSHYPEDLI-AKGRDIECLTLARAVGYHIERRVFLNANRTVVL--- |
4 | 6jnfA | 0.09 | 0.09 | 0.91 | 0.57 | EigenThreader | | WKNISKQDYNVKTLNPGEFT---GVAVASFLQSVTPQLALGLESAP------GDAGVSYLTRSKKQDWIFSGQLQA---NGALIASLWRQNVEAGQPTVEGSTTIGASNGKVACFLERKVLPTLSVLFCGEIDHFKNDT |
5 | 3k7dA2 | 0.11 | 0.08 | 0.69 | 0.31 | HHpred | | -----------------------------GTLPVMKVSDHLTWLAEAMIDYGKPNHLGWELGYSSDLDLIFLHDCPMDA------------M-TDGEREIDGRQFYLRLAQRIMHLFST-RTSSGILYEVDARLPSGAA |
6 | 6wi5A | 0.22 | 0.10 | 0.46 | 0.43 | MRFsearch | | -----------------------------------------------------------LEEVKRESNSVEVHVETRKNGEVEVHVRIRH----------DDKETIERLVERILREIKKLDKNSEVEVRTTTK------ |
7 | 6neqz | 0.12 | 0.11 | 0.93 | 0.38 | FFAS-3D | | --EDTQNEGKKTKKNKTAFSNVGRKISQRVIHLFDEKGNDLGNMHRANVIRLMDERDLRLVQRNTSTEPYQLMTGLQILQERQRLREMEKANPKTGPTLRKELHDLDTKTKQIQQWI-----KKKHLVQITIKKGK--- |
8 | 4pf1A1 | 0.10 | 0.09 | 0.94 | 0.67 | SPARKS-K | | ---FSEDSDSDIPEKFTPKTDLFDYTRREEMIPM-RDGVKLQNTPERRTLRFNSSSLSMVVPTSAARYIIVYQDVRGKYG----SEGGYMMNKPLTGPLNTTGTDHSTDTYDTIDWLVKNIPESNGRVAAIGGSYEGYT |
9 | 4etpA | 0.12 | 0.06 | 0.50 | 0.46 | CNFpred | | --------------------------------------------------------VGQLVQSSLDGYNVAIFAYGQTGSGKTFTMLN-------------GDGIIPSTISHIFNWINKLKT-KGWDYKVNAEFIEIYN |
10 | 6nbqD | 0.03 | 0.03 | 0.88 | 0.83 | DEthreader | | -TPGMQ-W-S-LRDMLVFLAWELELIPVYLLADAHGEHLAGILLKM-GGLNLVLGVNII-AALSYRLKKISSSHGF-I----------LILEEMGGVGQKFAFTASLASLLMGFVAELMVFFAVVAAGLTYLMLIFYGP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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