Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | VTDTVHMLQFDSPLGSHAAVHLNTGLDSMVNDITEDENPGSLESTLRYTDQKVLHKRYNYFDAQWISWAWDNANNDLLRIAANDRGLEEEEYDSSVYNYFRDSPAWKYCWTVTDNPHPGEGEDYNQLGAENAIHGELYFNTYGGVDGYCNDNKDGAQC |
1 | 4mbrA2 | 0.07 | 0.05 | 0.75 | 0.61 | DisCoVER | | VSVDSRITNIDDVGKKMTYISQIN-----------------------------VDGKSLYGLYTRIYNYSTADLKNSTIKIYKTSESMVEDVTSKFANSYPEK----GWYDIYWGQFIAETYVIV-VE-TPFAVTLNTTLSDYVEHNHTY---SSES- |
2 | 6kpbC | 0.05 | 0.04 | 0.75 | 0.83 | DEthreader | | ---------EEI--VRRFILKVSYLLTN--IDDAGVHHQ--KEVLEQMAFPVLVSSV-KV-MVVTEQDSDHESTYAALFDCLETKVSDRIKVEKMLFGEEIKNCRRERHKL-MLARRLQGCFDGYRWQD--RPLYS--------V-S----------- |
3 | 3sluA | 0.08 | 0.08 | 0.99 | 0.52 | CEthreader | | AAGDILAAEVVKGGTRHQAFYYRSDKGGNYYDEDGRVLQGFNIEPLVYTSPFGYRMHTWRLHTGIDYAAPQGTPVRASADGVITFKGRKGGYGNAVMIRHANGVETLYAHLSAF-SQAQGNVRGGEVIGFVGSTGHLHYEARINGQPVNPVSVALPTP |
4 | 3k1qI | 0.06 | 0.06 | 0.89 | 0.67 | EigenThreader | | DLKPTGKLWRPVGTSVSGYVGATAGDALDNFYNVAIHRYPALKPGNPDTKLPDAQAHPLGGATYTVQLGIDMNAM----------ILPYDTNP-------DLSTSVPAFVLIQTSVPIQQVTRETITGIPYIYGLGTFLIPLMDGLLTVTPVLLRETT |
5 | 1u1iA | 0.11 | 0.08 | 0.77 | 0.26 | HHpred | | ----ETVVINVASTEPLPNYEEHGSLEGFERMIDEDR-KEYASASMNFTKTPMFAYRNM-EVVGWMSYNILG-DYDG--KVLSARDNKELSKDKVLEKMLGYLVDNKTAFDFVHF---------KGFL-GKLMKFYFIWD------------------ |
6 | 2l5oA | 0.14 | 0.08 | 0.53 | 0.35 | MRFsearch | | ---KVTLINFWFPSCPGCVSE-----MPKIIKTANDYKN---------------------KNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYKAVGQAFGT-QVYPTSVLIG--------------------------------------------- |
7 | 5o6uB | 0.16 | 0.11 | 0.73 | 0.41 | FFAS-3D | | ------GISFKLSLGQLFRIHGD---ASLLHDLQGLDWLGPLAGYCQVTAVSAVPD-----HVQYRIVSVSNLSKAKLKRLIARGSIDKDGEKRYKVKMLSSSTGQVYRKFFEFSDIQAHPLDGE-------------FDSYG--------------- |
8 | 5kdmD | 0.09 | 0.08 | 0.93 | 0.58 | SPARKS-K | | ------LDTVRYDYGHYLIMLGPFYVQTALELFSALYPAPCIGYARPPGPSAVIEHLGSLVPKGGLLLFLSH----LPDDVKDGLGTGPG-MQQFVSSYFLNPACSNVFITVRQRGEKINGRTCDMAGCQHYVLGSTVLNFVNDLASPVSTAEMMDDF |
9 | 4h5uA | 0.17 | 0.11 | 0.67 | 0.63 | CNFpred | | --KRVAVAQLCS---SADLTKNLKVVKELISEAIQK-------------------------KADVVFLPEAS-NPLHSRYLAQKSPKFIRQLQSSITDLVRDNRNIDVSIGVHLPP----SEQDLLEGNDRVRNVLLYIDH----------------- |
10 | 1rh9A | 0.06 | 0.05 | 0.79 | 0.83 | DEthreader | | ------LMYVFAMNVARTWAFS-RPLQSVNFGGKKYVDDDFFPVKGFYKNNKVLTRVTKVAYKSWELINE--P---RCPSDLSGK--TFQNWVLEMAGYLKSDSHLLEIGLEGFY-------MRQYNSYIFGTN---------DF---TTIHMIIFIL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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