Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | YIINRFNDSIINKEMYNDLDKSIDYGCIFTVGCLDECNNCPICKLSKEQLIDVLSGSERSSENECSVLVNCATKCIQQTNFNFIKTNYCLRHQCAYHCFDGSCPTCSAFVTRIFNQICIKGNLRKRINFKGQCYEMFREIVYKKFEKKFK |
1 | 1ljrA | 0.02 | 0.01 | 0.80 | 0.58 | DisCoVER | | VSQ--PS---R---AVYIFAKKSLIHWYPSDLARARVHYLGWHADC--IRGTFGIPLWVQVRTAMDQALQWLEDK------FLGDRP--F---L--AGQQV-T-LAD-L--MALEELMQPVALE-LFERLAAWRGRVEAFLAELCQEAH- |
2 | 6y795 | 0.09 | 0.07 | 0.84 | 0.83 | DEthreader | | ----I-ALTITMLLAITTISS-M-V-HIYSIMHQVRFFSL--LSMFTFWMIILV-TGSFVLFVGWEFIGVTSYLIAMKSSANWLTLAMEGPT-PV----------SS-LLHATLVTA-GIYLLRSALLIIGTMLMMHLGHATKAAGWILK |
3 | 4f7rA | 0.06 | 0.06 | 0.99 | 0.49 | CEthreader | | QIRVYRQKIEKELSDICNDILKLLQEQFVPRSTNADAKVFYYKMQGDYYRYLAEYSDKEKIAGSALNAYNSAFEISQQLPPTHPIRLGLALNFSVFYYELASPDRACELARKAFDAAITD--LDKLTEESYKDSTLIMQLLRDNLNLWVT |
4 | 1zb1A | 0.07 | 0.07 | 1.00 | 0.68 | EigenThreader | | SSQWRTFYDEKATSELDHLRNNANGFTWYDAEYSSEKSCTLFNIAVIFTQIARENISIANLTKAFCHAEAQELFVLKLLNDQYTLISKLSRATCNLFQKTTVTCKLHFYKSLSAYYHGLHLEEENRVGEAIAFLDFSMQQLISSLPFKTW |
5 | 4wv4B | 0.05 | 0.01 | 0.28 | 0.23 | HHpred | | -------------------------------------------------------------------------------------------------------LARRRTLQVVVSSLLTEAGFES----AKASVETLTEMLQSYISEIG- |
6 | 5ue8A2 | 0.13 | 0.11 | 0.89 | 0.42 | MRFsearch | | -------DPQIVGHYMRRFAKTISNVLLQ----KVPCILMNNTQQLRVQLEKMFEA------MGGKELDAEASGTLKELQVKQPHIEECVRQMDILSQVKGVAQDADNVLQPIMDLLDSNLTLFAKICEKTVLKRVLKELWKLVMNTMER |
7 | 6mzcI3 | 0.06 | 0.05 | 0.85 | 0.53 | FFAS-3D | | --------------LIPAVMT-----CIVSRQLCLRPDVDALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIA---GLAELGHDVPRLQQEADHVQSLLLKHAPVLAKLRPPPDNQDLCSQVVKARAQAALQ |
8 | 5cwdA | 0.08 | 0.07 | 0.91 | 0.67 | SPARKS-K | | ---TKEDARSTCEKAARKAAESND-----EEVAKQAAKDCPT-KEAARSFCEAAARAESNDEEVAKIAAKACLEVAKQAGMPTKEAARSFCEAAARAAAESNDEEVAKIAAKACLEVAKQAGMP-----TKEAARSFCEAAKRAAKESND |
9 | 3nd2A | 0.10 | 0.08 | 0.82 | 0.56 | CNFpred | | ------------NNILIAIVQGAQ----------STETSKAVRLAALNALADSLIFIKNNMEGERNYLMQVVCEATQAEDIEVAAAFGCLCKIMSLYYT-----FMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYE |
10 | 6v85A3 | 0.06 | 0.05 | 0.85 | 0.83 | DEthreader | | L--V-----FKDQLLLKNWDKLVKSCS------------TVVAAWHDDWKRISDWSYGRILLCTVILNASKLC-LT-ADVLECTSSCSNLATTVMRLTEKDICYLNIYMTIKQLSYDIIFPSIGDQIT--LEYIHLVSRLALLPNYLSCD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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