Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | DWNLLVMLSGTVSLISILISGLLFGVFTSGEQNRANFHTESKNDRKKRQKIGGCVLLFGLPNMIAVLVYYLVS |
1 | 6egcA | 0.06 | 0.05 | 0.92 | 1.33 | DEthreader | | EIIRELERSLREQEELAKRLKELLRE-----LE-RLQRGSSDEDVRELLREIKELVEEIEKLAREQKYLVEEL |
2 | 4ry2A | 0.09 | 0.08 | 0.92 | 1.33 | DEthreader | | KTVLCIFLASLLYTALGIAGSF-YI--K---FLFDDLIFEKLNDLHIISAGFAVIFLLQIFLNYYRSILVTKL |
3 | 6vq6f | 0.08 | 0.08 | 1.00 | 1.10 | SPARKS-K | | KLAACGIVLSAWGVIMLIMLGIFFNVHSLIEDVPFTEKDFEQNIYNLYEQVSYNCFIAAGLYLLLGGFSFCQV |
4 | 6w4sF | 0.09 | 0.08 | 0.95 | 1.33 | DEthreader | | ARLKVAQTSLVVQNVSVILCGIILM-MVFL--HK-HLLTYHGWVLTSCYILIITIANIANLASTATAITIQDW |
5 | 4abmA | 0.03 | 0.03 | 0.90 | 1.33 | DEthreader | | RLRDTEEMLSKKQEFLEKKIEQEL-T-A----AKKHGTK-NKRAALQALKRKKRYEKQLAQIDGTLSTIEFQR |
6 | 4ry2A1 | 0.09 | 0.08 | 0.92 | 1.33 | DEthreader | | KTVLCIFLASLLYTALGIAGSF-YI--K---FLFDDLIFEKLNDLHIISAGFAVIFLLQIFLNYYRSILVTKL |
7 | 6k61L | 0.11 | 0.11 | 1.00 | 0.24 | HHpred | | ANANLAGLLGAIGLVVLFTLALSYANSNPPTALASVTVPNPPDAFQSKEGWNNFASAFLIGGIGGAVVAYFLT |
8 | 6vq6f | 0.07 | 0.07 | 0.97 | 0.61 | DisCoVER | | -AACGIVLSAWGVIMLIMLGIFFNVHSLIEDFTEKDFENGPQNIYNLYEQVSYNCFIAAGLYLLLGGFSFCQ- |
9 | 1ocrN | 0.11 | 0.11 | 0.96 | 0.22 | MRFsearch | | -WAKIHFAIMFVGVNMTFFPQHFLGLSG--MPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFAS |
10 | 5jqzA | 0.04 | 0.04 | 0.95 | 0.97 | SPARKS-K | | ----TAIEANSRMLKALIEIAKAIWKALWANSLLLEATSRGDTERMRQWAEEARKIYKEAEKIIDRADEIVEE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|