Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | LGDFWSSNTINLYLHRRYYDLVDPDSPDNGILKKGREIFLTGCCLRSATEGSGCRRLLPTEYLVILLDENQDEDAMLLGAQFCSDSFSSISLDSVKSGASYSFYARIESIGLLEIQGKFGSLQRKQITLVDND |
1 | 2x5aX1 | 0.07 | 0.05 | 0.80 | 0.58 | DisCoVER | | -------------MVRQYKIHTNL-D--KVWDVKVRFYQPSNLGLQSTNVMGTRSITQPQIEFKLETFGLMKDFVNDIFVTLEYQTEIFQVY--------ADLALADV-TKTEGYGKNGTFSEKITFDIITK- |
2 | 4gvqA | 0.05 | 0.05 | 0.84 | 0.83 | DEthreader | | YIMYTVC----FVTEYTPCLQKAGPTERFNEDPKLIVSGAGRCPISPILNDLKAMTNSYYGSVFLTVKK-YDEILKNVPSCTSDYGKPFYF-YDFY-KIDLFAPAQIAVN-------LE-GKTYVHG------ |
3 | 2x5aX1 | 0.17 | 0.15 | 0.90 | 0.59 | CEthreader | | -------------MVRQYKIHTNLDGTDDKVWGKVRFYQPSNLGLQSTNNMGTRSITQPQIEFKLETFGESLEENYQLMKDFVNDSKKFVTLEYQTEIFQVYADLALADVTKTEGYGKNGTFSEKITFDIITK |
4 | 2iheA1 | 0.15 | 0.11 | 0.77 | 0.60 | EigenThreader | | -ARGLNQVFLIGTLTARPDMRYTPG--GLAILD----LNLAGQ-DAFTDESGQERE--VPWYHRVRLLG--RQAEMWGDLLEK------------------GQLIFVEGRLEYRQWGEKKSEVQVRAEPLEGR |
5 | 4gopC | 0.18 | 0.16 | 0.89 | 0.45 | HHpred | | LLDDS--GEIKATGFN---DAVDRFY---PLLQENHVYLISKARVNIAKK---QFSNLQNEYEITFIEECTDA-TDVPEVKYEFVRINELESV--EANQQCDVIGILDSYGELSEIVSQRPVQKRELTLVDQG |
6 | 1fguA | 0.12 | 0.10 | 0.79 | 0.78 | MRFsearch | | --------EIRATAFNEQVDKFFP------LIEVNKVYYFSKGTLKIAN---KQFTAVKNDYEMTFN---NETSVMP-------VQFDFTGIDDLENDSLVDIIGICKSYEDATKITVNREVAKRNIYLMDT- |
7 | 5mzvC2 | 0.24 | 0.17 | 0.69 | 0.35 | FFAS-3D | | ----------------------PPDIPDETCVIYEYSGNMT-CTWNAGKLTY-----IDTKYVVHVKSLETEEE-----QQYLTSSYINISTDSLQGGKKYLVWVQAAN--------ALGMEESKQLQIHLDD |
8 | 3oc5A2 | 0.13 | 0.11 | 0.83 | 0.60 | SPARKS-K | | ---------------NEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVNELSKHGYTNLWDVQFKVLVGVPHAE-------TGVIYDPVYEETVKPYTGKKLYNVSTNDMHNGYKNTMFSNSNY-KTQILLTKGD |
9 | 4ci1B | 0.10 | 0.07 | 0.67 | 0.74 | CNFpred | | -----------------------------TLHDDDSCQVIPVLPHVM-------VMLIPGQTLPLQLFH--PQEVSMVRNLIQDRTFAVLAYSNV-REAHFGTTAEIYAYREEQE-----GIETVKVKAIGRQ |
10 | 1dl2A | 0.06 | 0.05 | 0.77 | 0.67 | DEthreader | | --MPRGNQPLGWIVDSVDTLMLMNSSTLYKEFEAQRHWLDFIAEVN----------VFETIRMGL-ALSEVGN-KTVYLN-KAIDLGDRLALALINHSG------------RRFTSLKSNNMEWLAAHPF--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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