>PF17238 (187 residues) INEHEILSEVLRCTLKINKQWGAAPYAMYYESVTGRPVISSEEIVPRLVNILESGYAMSI GQRTWSDLGTDRAWEKELEAQKNLRTFSIEMLLSLSALCQRAGSWGKVFTIMEHYLQYLV PKKVMHNNVGETLSDICSSILVQATSQFAQVMFESAFDIFLLVSYLLNISEQVNMSQQDI CKLRLEL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | INEHEILSEVLRCTLKINKQWGAAPYAMYYESVTGRPVISSEEIVPRLVNILESGYAMSIGQRTWSDLGTDRAWEKELEAQKNLRTFSIEMLLSLSALCQRAGSWGKVFTIMEHYLQYLVPKKVMHNNVGETLSDICSSILVQATSQFAQVMFESAFDIFLLVSYLLNISEQVNMSQQDICKLRLEL | |||||||||||||||||||
1 | 3h7nA | 0.11 | 0.09 | 0.79 | 1.41 | HHpred | ETDGSELFKYLRTLNGFASTLSNDVLRSISKKFLDPDSMTTVEKFTDIFKNCLE------------------------------NQFEIT---NLKILFDELNSFD-IPVVLNDLINNQMKPFWKKDISAIKFDGFTSIISLESLHQLLSIHYRITLQVLLTFVLFD---LDTEIFGQHISTL-LD- | |||||||||||||
2 | 4hrtA | 0.14 | 0.09 | 0.62 | 0.65 | DisCoVER | --------VDAAVA-KV--CGSEAIKNLRRSW---------------GV--LTGLMLMSNLFTLRPDTKLGDVQKGLRGHAITLT-FVDSLDRLKCVVEKFAISGDAFG--------------------AIVEPMKET--LKARMGN--YYSDDVAGAWAALV-GV------VQA-------A---- | |||||||||||||
3 | 6owsA | 0.06 | 0.04 | 0.68 | 0.83 | DEthreader | SPIIGITLVLAAVFLPMAFAGVKQTLTMSVSILFSL--------------------PTAFMPEEDVLPPGFGISLQEKQSESQMAFLLGLSMLVVFLVLALYISVVAKNALPILTSLAFTCIPVIATGASSETQHA-----------------------GV--G---------------MISATILA | |||||||||||||
4 | 3m1iC1 | 0.06 | 0.06 | 0.93 | 0.52 | CEthreader | LTKFQDNPDAWQKADQILQFSTNPALSILDKLITRKWKLLPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEWEFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSAEQ-------------MTQAKALHLKNSMSKEFEQIFKLCFQVLEQGSSSSL-IVATLESLLRY | |||||||||||||
5 | 1sjpA | 0.08 | 0.07 | 0.87 | 0.77 | EigenThreader | RGIEKAVEKVTQIAATAAISAGDQSIGDLIAEAMDKVGFGDRRKAMLQDMAILTGGQGDTDAIAGRVAQIRQEIENSHRIEDAVRNAKAAVEEGAPTLDELLEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNVKVTRSALQNAASIAGLFL--------------TTE---------- | |||||||||||||
6 | 5a9q1 | 0.13 | 0.10 | 0.79 | 1.34 | HHpred | DVDIRDVICLIKCLRLIEESVTVDMSVIMEMSCY--NLQSPEKAAEQILEDMITIDV-----------------E----------NVMEDICSKLQEIRNPIHAIGLLIREMD----YETRM----NLTQLYGSNTAGYIVCRGVHKIASTRFLICRDLLILQQLLMRLGDAVIWGTGQLHRTA--- | |||||||||||||
7 | 5a9q1 | 0.13 | 0.10 | 0.79 | 0.52 | MRFsearch | --DIRDVICLIKCLRLIEESVTVDMSVIMEMSCYNL--QSPEKAAEQILEDMITI---------------------------DVENVMEDICSKLQEIRNPIHAIGLLIREMD--------YETRMNLTQLYGSNTAGYIVCRGVHKIASTRFLICRDLLILQQLLMRLGDAVIWGQLLLHRTAPLL | |||||||||||||
8 | 6bk8L1 | 0.12 | 0.11 | 0.94 | 0.76 | FFAS-3D | --QRENWEMIRSHVSPIISNLTMDNLQESHRDLFQVNILIGRNIICKNVVDFTLNKQNGRLIPALSAL-----IALLNSDIPDIGETLAKELMLMFVQQFNRKDYVSCGNIL-QCLSILFLYDVIHEIVEKNSLRLVIAVMKICGWKLALVSKKTHDMIWEKLRYILQLSSTLRESLETLFEIR--- | |||||||||||||
9 | 6w2rA | 0.07 | 0.07 | 1.00 | 0.74 | SPARKS-K | EDERRELEKVARKAIEAAREGNEQLQRALEIARESGTKTAVKLALDVALRVAQEAAKRGNKDAIDEAAEVVVRIAEESNNSDALEQALRVLEEIAKAVLKSEKTAKKAVKLVQEAYKAAQRAEAAKRTGTPDVIKLAIKLAKLAARAALEVIKEALKKIVKAIQEAVESLREAEKREKARERVREAV | |||||||||||||
10 | 3gjxA | 0.12 | 0.12 | 0.96 | 0.69 | CNFpred | FSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENS---QNAPLVHATLETLLRFL-NWIPLGYIFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVYEEQFETLFTLTMMQLKQMLPNTNIRLAYEQNFIQNLSLFLCTFLKEHGQLLEKRREALMEALHYMLLVSE---VEETEIFKICLEY | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |