Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | LPNLRRIFASFRTEKEERGYSRTAFFNLIGFLGTCVVFSLIAQK |
1 | 6exnO | 0.09 | 0.09 | 0.98 | 1.33 | DEthreader | | AEARARLLN-TQGKKATRKIRERMLEESKRIAELQKRRELKQAG |
2 | 3g9gA | 0.05 | 0.05 | 1.00 | 1.33 | DEthreader | | RTKYADSILTTKSPYEATETIRIRLSQVKLLNKDFYLLFKELAN |
3 | 3cvfC | 0.00 | 0.00 | 0.02 | 1.17 | DisCoVER | | A------------------------------------------- |
4 | 1kijA | 0.03 | 0.02 | 0.89 | 1.17 | DEthreader | | GQVVYERLLEILNPRIAKA-VYE-KRAAQAREAARKARELV--- |
5 | 4z2cA | 0.05 | 0.05 | 1.00 | 1.33 | DEthreader | | IAMATNMLAKILSLRQILDAYIEHQKEVVVRRTRFDKEKAEARA |
6 | 4byfA1 | 0.09 | 0.09 | 1.00 | 1.33 | DEthreader | | ESTLREALTHPLNLEQAAYARDALAKAVYSRTFTWLVGKINRSL |
7 | 5kn7B | 0.15 | 0.14 | 0.93 | 0.24 | HHpred | | ELNLRIALPY-LTPQQRIAITEKAVRNELTSYFEFLSIWGSS-- |
8 | 5t77A | 0.07 | 0.07 | 0.95 | 0.33 | MRFsearch | | --AFVPLYSEKSGEEKDKFLSSVINGFSLIILALVILSYFFPEL |
9 | 4yxxA1 | 0.11 | 0.11 | 1.00 | 0.95 | SPARKS-K | | ALKILKVAAELTTVEEAVKRALKLKTKLVSLEQALKILEVAAEL |
10 | 3jacA | 0.07 | 0.07 | 1.00 | 0.89 | MAPalign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|