Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | NASSYQSSIFSSPSLATTATTEASVVQFVTEISLQDALPKTFYDMYAPEVVMSDPGNLLCNGRPKFTERELLDWELNDIRSLLIVENLKPEWGGQLPRVISPRADMPQFRLQLLPLSSTDEFIIETLVSSDLYAEFNLDYQFKLTSAKYTVAAARKRHEQAIGRHEPVMQLSKPEWRNIIENYLLNIAVEAQCRFDFKQRCSEFK |
1 | 5yfpC2 | 0.07 | 0.05 | 0.81 | 0.67 | DisCoVER | | LLTSARDFQQVVVMAKEATSRLSGIISKFKLLDGLTYDIVEMARAE-----------QISLAIRLF--KIYDLEERED-LRIEARNIKKKEIEIEKKVIE------YPTNKGLYQEIMSGTIS-TR--TAPRGYKH-FL--INGINNSISEMFGEMRE-KYGDQKFDVLNMDWIFNELIIVKEHIANC--CPPHWN--------- |
2 | 6oqqA | 0.07 | 0.05 | 0.77 | 0.83 | DEthreader | | ----YFARREVTLSHHYEMADYLLKQRDVHSKYYLSVK---------IFHTHFDGRYQALVQLLNLKFGNYLYLNTIAEYLLVIQLTLSY-------------------------VWREANVMFTSCAEA-IHIMTGIPSRALTLLKRANIEKHFRQTQFWTDYLLQQYGESPLRLEKLLYATVTLIEGTMQLDKE--------- |
3 | 2f33A | 0.09 | 0.08 | 0.97 | 0.46 | CEthreader | | ESHLQSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKI------GIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLLTEMARLLPVQENFLLKFQGKEFNKAFELYENELDALLKDLCEKNKQELDIN |
4 | 6f5dD2 | 0.07 | 0.06 | 0.87 | 0.58 | EigenThreader | | ----ISVPVGRETLLGDAIDQRGPVGEKLRMPI-----HADQAAEDAV--LTTGIKVIDLILPYCKGGKGHGGF-----SVFAGVGERTREGTDLYLEMVIDLKGESKCVLVYGQMNEPPGARAQSALTMAEYFRDVEGQ-DVLLFIDNRFTQANSEVSALLGRIPAYQPTLAEDLGQLQEAPATTFSAVAESG----------I |
5 | 1qzmA | 0.13 | 0.04 | 0.31 | 0.29 | HHpred | | ---------------------------------------------------------------------------------------------------------------------------------------SGYTEDEKLNIAKHLLPKQIERNA----LKKGELTVDDSAIIGIIRYYTRGLE--REISKLCRKAVKQL- |
6 | 3hjeA | 0.11 | 0.05 | 0.50 | 0.37 | MRFsearch | | -------------------------------------------------------------------------------MRISAISEIPDEWAKKVNEWHNI--------------KNDEYRLYQTIVGSF----DGFNNEYKERLKAHMIKALREAKVHT------DWVNVNTEYEKKMTYLIDKMFNNEKFMESFLEFESKID |
7 | 5olkA1 | 0.11 | 0.05 | 0.47 | 0.58 | FFAS-3D | | ----------------------------------------------------------------------------------------------EIKKIIKRDYSTAPF---------VLEKITNAIANA-MAALGHGSEQDAKLISMQVYESLLNNKEQESEY-----IPTVEQVQDMVEDKLMSSHDVAKAYIIYRNKRALER |
8 | 5cqcA1 | 0.13 | 0.12 | 0.92 | 0.64 | SPARKS-K | | VNKGMNSSRFDKSSAFYLGDDVSVLLTGAYGFQSKK-----------NDQQRPDSDYVAYHVDAK---SDAGWVNDKLDRRLSEISEFCSKATQPLPFVTDITKGVQHQVLLTISYDPKSKQLTPTVYDSDTYSE-SLSSYFKGKTCDEILTQSIEKAI--KSTDFTLGKFTRNCGSYTFRTIKEVISSSAQHVQDIESCIKYRN |
9 | 1itwA | 0.10 | 0.07 | 0.74 | 0.45 | CNFpred | | ----------------------------IRILSPVEATRFSLARIR---------KDTISVTG-----NVLRDYLT-DLFPIMELGTSA-----MLSIVPLM----SGGGLFETGAGGSAPKHVQQFLEEDSLGEFLAL-NPKALVLASTLDQATGKILDNNKSPARKVEIDNRGSHFYLALYWAQALAAQTEDKELQAQFTGIA |
10 | 1suvA | 0.04 | 0.03 | 0.75 | 0.83 | DEthreader | | --TKKDFEDVVVKVIVQLTVSNVLK-EIKILNIFGVGTLLKLAQMFSD-------------M--KDGFQPSRSII--FA--SW----S--AGDFGSGAEWLEGYSLHKAYINDKAVLGNFK--VS--AS----------PL-LYTLIEKTMQNVKHPVTGQ------CEIKVARAAAEVAGQFVIKLTHD-VELFKDRFVMKK-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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